Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4435 212 1e-52 seq4205 167 4e-39 seq916 104 4e-20 >seq4435 Length=230038 Score = 212 bits (234), Expect = 1e-52 Identities = 221/293 (75%), Gaps = 49/293 (17%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16967 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 17026 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| |||||| |||||||||||||| Sbjct 17027 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 17084 Query 116 ----------CCAGCCACC--AA--------CCATAGTCGAT-------GG---GGCTAT 145 || ||| | || || | | |||| || | |||| Sbjct 17085 GTAGTAAAAACCCGCCGGCCGAAGCCGGGGGCCTTCG-CGATACCATAAGGTACGCCTAT 17143 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 17144 TTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 17203 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 17204 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 17256 >seq4205 Length=14506 Score = 167 bits (184), Expect = 4e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || ||||||||||||| |||||||||||||||||| | ||| |||| Sbjct 760 CTATTTAGCAGGCTAGAGTCTCGTTCGTTACCGGAATTAACCAGACAAAACGCTCTACCA 819 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 820 ACTAAGAACGGCTATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 876 >seq916 Length=283 Score = 104 bits (114), Expect = 4e-20 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 214 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGATCTGTTATTG 273 Query 72 CCTCAAACT 80 ||||| || Sbjct 274 -CTCAATCT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796764315063