Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2577 174 5e-41 seq3869 152 2e-34 seq2643 134 5e-29 seq3279 129 2e-27 >seq2577 Length=17212 Score = 174 bits (192), Expect = 5e-41 Identities = 99/101 (98%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 11723 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGT 11664 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||| Sbjct 11663 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 11623 >seq3869 Length=61123 Score = 152 bits (168), Expect = 2e-34 Identities = 149/191 (78%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || || |||| ||||||| | ||||||||||||||| || | | || |||| Sbjct 21766 GAGTATGTAAGGAAACGATGAAAGTAGTGGTATTTCACCGGCAATGTTGCCATCTTCCAC 21825 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| | | | ||| | | ||||||||||||||| || ||| | Sbjct 21826 TTATGCTACACCTCTCATGCCTCCTTACAGTGCCAGACTAGAGTCAAGCTGAATAGGATT 21885 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||| |||| ||| |||||||||||| |||| | |||||||||||||||||||| Sbjct 21886 TTCTTTCCTCGCTAATTTTTCCAAGCCCGTTCTCTTGACAGTGGTTTCGCTAGATAGTAG 21945 Query 364 ATAGGGACAGT 374 ||||||||||| Sbjct 21946 ATAGGGACAGT 21956 Score = 113 bits (124), Expect = 1e-22 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 21530 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 21589 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| || ||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 21590 CTTTGACTGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 21649 >seq2643 Length=21090 Score = 134 bits (148), Expect = 5e-29 Identities = 74/74 (100%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15776 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 15717 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 15716 GAGGCATTTGGCTA 15703 >seq3279 Length=793 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 611 AGTAGATAGGGACAGTGGGAATCTCGTTAATCTATTCATGCGCGTCACTAATTAGATGAC 670 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 671 GAGGCATTTGGCTA 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635124404704