Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 118 8e-22
seq4212 86.0 5e-12
>seq3537
Length=3457499
Score = 118 bits (130), Expect = 8e-22
Identities = 161/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| || ||||| || ||||| | || ||| | ||| || ||||||| || ||
Sbjct 3065043 TTATTTAATGCGATTGAGACACTTCCTTGTGTGGGGAAGAAGGCTAATTGGGCATTAAAC 3065102
Query 61456 TGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514
||||||| || | | || |||| ||| |||||| | | |||||||||| |||||
Sbjct 3065103 TGGATCAATCATGAGAGCG-CTACGTTTCCTGAACGTGTAGTCGCATTTGCGGCAGTCGA 3065161
Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574
|||| | || |||||||| ||||| || || |||||| |||||||||| ||| | ||
Sbjct 3065162 GGGTATCTTCTTCAGTGGCAGTTTTGCAGCCATTTTTTGGCTGAAGAAACGAGGAGTCAT 3065221
Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
||| ||||| ||||||||||| || | || || || |||||
Sbjct 3065222 GCCAGGTCTCACCTTCAGCAACGAACTCATCTCGCGAGACGA 3065263
Score = 113 bits (124), Expect = 4e-20
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
||||| || || |||||||||||||| || |||||||| ||||| ||| | | || |
Sbjct 3064019 CATGTCTTAGCATTCTTTGCCGCTTCTGATGGTATCGTTAATGAAAATCTGATTGAGAGA 3064078
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| ||||||||| || | | || || ||||||||||| ||||| || ||||||||
Sbjct 3064079 TTCAGTCAGGAGGTGAAAATTCCCGAAGCACGTTGTTTCTATGGCTTTCAAATTGCCATA 3064138
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370
|| ||| | || || |||||||| | | ||||| || || || ||
Sbjct 3064139 GAAAATATTCATTCTGAGATGTATTCTTTGCTCATTGAAACTTATAT 3064185
>seq4212
Length=4365329
Score = 86.0 bits (94), Expect = 5e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072
|||||| | ||||| ||||| | || ||||| | | || || | ||||||||||||
Sbjct 3415519 AGATGCTAAATTGCATACAGCGACTTCTCCAGGACCAGAGTATTCAATAATTTCGGTGCA 3415460
Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132
|| || ||||| || ||||| | || ||| ||||| || |||||||| |||
Sbjct 3415459 CAAGTTGCTGCATTTGATAGTGCCTATATGCTGATGATTTGATTTTCGATTGCAATGATC 3415400
Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189
||||| | ||| || || || || || || ||||||||| | |||||| ||||
Sbjct 3415399 TTTGTAAAGCATATAAGGTGTTCCAGTTTCTACTTGGGACCTGAGAATGGCGAGCCA 3415343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397545599900720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |