Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3537 118 8e-22 seq4212 86.0 5e-12 >seq3537 Length=3457499 Score = 118 bits (130), Expect = 8e-22 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || ||||| | || ||| | ||| || ||||||| || || Sbjct 3065043 TTATTTAATGCGATTGAGACACTTCCTTGTGTGGGGAAGAAGGCTAATTGGGCATTAAAC 3065102 Query 61456 TGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||||| || | | || |||| ||| |||||| | | |||||||||| ||||| Sbjct 3065103 TGGATCAATCATGAGAGCG-CTACGTTTCCTGAACGTGTAGTCGCATTTGCGGCAGTCGA 3065161 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 |||| | || |||||||| ||||| || || |||||| |||||||||| ||| | || Sbjct 3065162 GGGTATCTTCTTCAGTGGCAGTTTTGCAGCCATTTTTTGGCTGAAGAAACGAGGAGTCAT 3065221 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||| ||||| ||||||||||| || | || || || ||||| Sbjct 3065222 GCCAGGTCTCACCTTCAGCAACGAACTCATCTCGCGAGACGA 3065263 Score = 113 bits (124), Expect = 4e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| || || |||||||||||||| || |||||||| ||||| ||| | | || | Sbjct 3064019 CATGTCTTAGCATTCTTTGCCGCTTCTGATGGTATCGTTAATGAAAATCTGATTGAGAGA 3064078 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||||||| || | | || || ||||||||||| ||||| || |||||||| Sbjct 3064079 TTCAGTCAGGAGGTGAAAATTCCCGAAGCACGTTGTTTCTATGGCTTTCAAATTGCCATA 3064138 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 || ||| | || || |||||||| | | ||||| || || || || Sbjct 3064139 GAAAATATTCATTCTGAGATGTATTCTTTGCTCATTGAAACTTATAT 3064185 >seq4212 Length=4365329 Score = 86.0 bits (94), Expect = 5e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 |||||| | ||||| ||||| | || ||||| | | || || | |||||||||||| Sbjct 3415519 AGATGCTAAATTGCATACAGCGACTTCTCCAGGACCAGAGTATTCAATAATTTCGGTGCA 3415460 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 || || ||||| || ||||| | || ||| ||||| || |||||||| ||| Sbjct 3415459 CAAGTTGCTGCATTTGATAGTGCCTATATGCTGATGATTTGATTTTCGATTGCAATGATC 3415400 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 ||||| | ||| || || || || || || ||||||||| | |||||| |||| Sbjct 3415399 TTTGTAAAGCATATAAGGTGTTCCAGTTTCTACTTGGGACCTGAGAATGGCGAGCCA 3415343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397545599900720