Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tribolium_20castaneum_20[refseq_20GCF_5F000002335.3_202016-03-10]
2,082 sequences; 165,944,485 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 86.0 7e-15
seq1176 86.0 7e-15
seq536 86.0 7e-15
>seq1530
Length=4154
Score = 86.0 bits (94), Expect = 7e-15
Identities = 104/135 (77%), Gaps = 10/135 (7%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68
||||||||||||||| || | ||||||||| |||||||||||| | |||||| |||
Sbjct 3747 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 3689
Query 69 GTA-----AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123
| | |||||||||| | ||||||||||| |||| ||||| || | || || ||
Sbjct 3688 GAAGTTTTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGTGCCGG-CCCACCT 3630
Query 124 C-ACAC-CAATGAAG 136
| |||| ||||||||
Sbjct 3629 CGACACTCAATGAAG 3615
>seq1176
Length=17792
Score = 86.0 bits (94), Expect = 7e-15
Identities = 104/135 (77%), Gaps = 10/135 (7%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68
||||||||||||||| || | ||||||||| |||||||||||| | |||||| |||
Sbjct 6506 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 6448
Query 69 GTA-----AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123
| | |||||||||| | ||||||||||| |||| ||||| || | || || ||
Sbjct 6447 GAAGTTTTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGTGCCGG-CCCACCT 6389
Query 124 C-ACAC-CAATGAAG 136
| |||| ||||||||
Sbjct 6388 CGACACTCAATGAAG 6374
>seq536
Length=16808
Score = 86.0 bits (94), Expect = 7e-15
Identities = 104/135 (77%), Gaps = 10/135 (7%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68
||||||||||||||| || | ||||||||| |||||||||||| | |||||| |||
Sbjct 6259 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 6317
Query 69 GTA-----AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123
| | |||||||||| | ||||||||||| |||| ||||| || | || || ||
Sbjct 6318 GAAGTTTTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGTGCCGG-CCCACCT 6376
Query 124 C-ACAC-CAATGAAG 136
| |||| ||||||||
Sbjct 6377 CGACACTCAATGAAG 6391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595187995188
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |