Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq22044 77.0 1e-11 seq4221 77.0 1e-11 >seq22044 Length=1403 Score = 77.0 bits (84), Expect = 1e-11 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| ||||| ||| |||| | | || ||||||| ||||||||||||||||| Sbjct 1219 GGTTTCACGTACTTTTTAACTCTCTATTCAGAGTTCTTTTCAACTTTCCCTCACGGTACT 1160 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 ||| ||||||||||| | | ||||||| ||||| Sbjct 1159 TGTTCGCTATCGGTCTCGTGGTTATATTTAGCCTTAA 1123 >seq4221 Length=1962 Score = 77.0 bits (84), Expect = 1e-11 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| ||||| ||| |||| | | || ||||||| ||||||||||||||||| Sbjct 1252 GGTTTCACGTACTTTTTAACTCTCTATTCAGAGTTCTTTTCAACTTTCCCTCACGGTACT 1311 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 ||| ||||||||||| | | ||||||| ||||| Sbjct 1312 TGTTCGCTATCGGTCTCGTGGTTATATTTAGCCTTAA 1348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817113919232