Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq22044 73.4 1e-10 seq4221 73.4 1e-10 >seq22044 Length=1403 Score = 73.4 bits (80), Expect = 1e-10 Identities = 75/97 (77%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | || ||| |||| | | | | | ||||||||| ||||||||||||||| Sbjct 1220 CGGTTTCACGTACTTTTTAACTCTC-TATTCAGAGTTCTTTTCAACTTTCCCTCACGGTA 1162 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 || |||| ||||||||| || ||||||||||| Sbjct 1161 CTTGTTCGCTATCGGTCTCGTGGTTATATTTAGCCTT 1125 >seq4221 Length=1962 Score = 73.4 bits (80), Expect = 1e-10 Identities = 75/97 (77%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | || ||| |||| | | | | | ||||||||| ||||||||||||||| Sbjct 1251 CGGTTTCACGTACTTTTTAACTCTC-TATTCAGAGTTCTTTTCAACTTTCCCTCACGGTA 1309 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 || |||| ||||||||| || ||||||||||| Sbjct 1310 CTTGTTCGCTATCGGTCTCGTGGTTATATTTAGCCTT 1346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241267958912