Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq5744 91.5 2e-16 >seq5744 Length=1527 Score = 91.5 bits (100), Expect = 2e-16 Identities = 135/185 (73%), Gaps = 5/185 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACAT 63 |||| || ||||||||||| ||||||||| | | ||||||||| | ||| ||||| | Sbjct 299 CCAGTACATTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATATGCCTGAATATTT 358 Query 64 T-ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCC 121 | ||||||||||| ||||||||| | | | |||||||| | ||||| ||| | Sbjct 359 TGTGCATGGAATAATGGAATAGGACCT-CTGCTCTATTTTCATTGGTTTTTAGACCAAGA 417 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| ||||| | | |||| ||| | |||| ||||||| Sbjct 418 GGTAATGATTAATAGAAGCAGTTGGGGGCATTA-TATTACGATGTTAGAGGTAAAATTCT 476 Query 182 TGGAT 186 ||||| Sbjct 477 TGGAT 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511867354720