Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq47235 196 7e-48 >seq47235 Length=6691 Score = 196 bits (216), Expect = 7e-48 Identities = 181/224 (81%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 3593 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 3650 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | ||||||||||| | ||||| ||||||| | | |||| | ||| Sbjct 3651 CTCGTTCACGGGGAACAATTGCAAGCCCCGATCCCTATCACGAAGGAGGTTCAGCGGATT 3710 Query 120 ACCCGGACCTG----TCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCG 173 ||| || || || ||| ||| ||| || || ||| | | ||||||||||||| Sbjct 3711 ACCTGGTAATGCTTCTCAGCCCAGGAAATAATTACACGCTGATTCCTTCAGTGTAGCGCG 3770 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||||||||||||||||||||||||||||||||||| || Sbjct 3771 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATCGC 3814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751414387990