Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq47235 136 2e-29 >seq47235 Length=6691 Score = 136 bits (150), Expect = 2e-29 Identities = 130/161 (81%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83 ||||| || |||| | |||||| |||| ||| || |||||| |||| ||| |||||| | Sbjct 2877 GTGAA-CTGCTTCTAAGAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGCGGGTGGTAAACT 2819 Query 84 TCTTCTAAAGCTA-AATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141 | ||||| |||| |||| | ||| ||||||||||||| ||||||| |||| ||||| Sbjct 2818 CCATCTAAGGCTATAATAC-GACCACGAGACCGATAGCGGACAAGTACCGTGAGGGAAAG 2760 Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||||||| |||||| | |||||||||||||| |||||||| Sbjct 2759 TTGAAAAGAACTTTGAAGAGAGAGTTAAAAAGTACGTGAAA 2719 Score = 134 bits (148), Expect = 6e-29 Identities = 101/119 (85%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| |||||||||||||||||||||||| | ||| ||||| ||| |||||| ||| Sbjct 2117 GTTGGTACCCGAAAGATGGTGAACTATGCCCGGCCAGGATGAAGTCAGGGGAAACCCTGA 2058 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||||||||| |||||||||||||||| | ||||||||||||||| Sbjct 2057 TGGAGGTCCGCAGCGGTTCTGACGTGCAAATCGATCGTTTGAGCTGGGTATAGGGGCGA 1999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078275720300