Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq47235 192 1e-46 >seq47235 Length=6691 Score = 192 bits (212), Expect = 1e-46 Identities = 177/221 (80%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3814 GCGATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGG 3755 Query 174 AGCCAACGAGT--TCATCACCTTGGCCG-GAAGGTCTG---GGTAATCTTGTTAAACTCT 227 | || || || | || ||| ||| | |||| | ||||||| | || ||| Sbjct 3754 AATCAGCGTGTAATTATTTCCTGGGCTGAGAAGCATTACCAGGTAATCCGCTGAACCTCC 3695 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||||| | ||||| | | |||||||| || | | | |||||||||| || |||||||| Sbjct 3694 TTCGTGATAGGGATCGGGGCTTGCAATTGTTCCCCGTGAACGAGGAATTCCCAGTAAGCG 3635 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||||||| |||||||||||||||||||||||||||| Sbjct 3634 CGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 3594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946438583808