Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq26376 495 1e-137 seq69928 284 4e-74 seq47235 284 4e-74 seq54157 266 1e-68 seq17894 154 5e-35 seq8627 91.5 5e-16 seq43961 80.6 9e-13 seq34725 75.2 4e-11 >seq26376 Length=1812 Score = 495 bits (548), Expect = 1e-137 Identities = 294/307 (96%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 1193 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 1134 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1133 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1074 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1073 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1014 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 954 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 953 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACACCA 894 Query 537 CTTTCTG 543 ||||||| Sbjct 893 CTTTCTG 887 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 1495 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 1436 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 1435 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 1381 Query 127 GGCCCGCG 134 || |||| Sbjct 1380 GGGTCGCG 1373 >seq69928 Length=4916 Score = 284 bits (314), Expect = 4e-74 Identities = 168/175 (96%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 60 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| || Sbjct 61 GAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGCTT 120 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 121 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 175 >seq47235 Length=6691 Score = 284 bits (314), Expect = 4e-74 Identities = 168/175 (96%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 60 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| || Sbjct 61 GAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGCTT 120 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 121 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 175 >seq54157 Length=1706 Score = 266 bits (294), Expect = 1e-68 Identities = 164/175 (94%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 AGTAGATAGGGACAGAGAGAATCTTGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 60 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||| | || |||||||||||||| |||||||||||||||||| || Sbjct 61 GAGGCATTTGGCTACCTTTAAAGGGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGCTT 120 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct 121 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATAGTGTCAACA 175 >seq17894 Length=870 Score = 154 bits (170), Expect = 5e-35 Identities = 117/137 (85%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||| ||||||| | || ||| |||| | | |||| |||||||||||| Sbjct 137 CTCCCACTTATGCTACACCCCGGCATGTCTCCGAACAATGCCAGACTGGAGTCAAGCTCA 78 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 77 ACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 18 Query 356 GATAGTAGATAGGGACA 372 |||||||||||||| Sbjct 17 TGGAGTAGATAGGGACA 1 Score = 116 bits (128), Expect = 1e-23 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||| |||| || ||| |||| |||||||||||||||||||| Sbjct 595 CTTTTGCTCTACATGAGGTTTCCGTCCTCATTGAGCTGGCCTTAGGACACCTGCGTTATT 536 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 ||| |||||||| ||||||||| ||||||||||||||| | |||| || | ||||| Sbjct 535 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCGGTGTCCTCGAATCGGAT 477 >seq8627 Length=602 Score = 91.5 bits (100), Expect = 5e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 55 AGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 1 >seq43961 Length=8110 Score = 80.6 bits (88), Expect = 9e-13 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 ||||| |||| | ||||| ||||||||||||| | ||||| ||| || ||| || | Sbjct 4111 ATAGGTACAGAGAGAATCGTATTAATCCATTCATAAGTGTCACCAATCAGTTGAGAAGAC 4052 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 | |||||||| | || ||||||| | | |||| |||||||||| Sbjct 4051 AATTGGCTACTTCAAAAGAGTCAAAATGACTCTTGCCGTTTACC 4008 >seq34725 Length=9048 Score = 75.2 bits (82), Expect = 4e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 9042 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTATGGAGTAGATAGGGACA 8994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633885528128