Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq47235 295 2e-77 >seq47235 Length=6691 Score = 295 bits (326), Expect = 2e-77 Identities = 236/282 (84%), Gaps = 3/282 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || |||| ||| || ||||| ||||| | ||||||||| Sbjct 5199 GTACTCATTCCGATTACGGGGCCTCAAATGAGTCCCGTATCGTTATTTTTCGTCACTACC 5258 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5259 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 5318 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct 5319 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCACGGT 5378 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | |||||| |||| |||||||| |||||| ||||||| || | ||||||| Sbjct 5379 AGGCGTCGAACCTACCGTCGACAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 5438 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279 | || || |||||| | | |||||||| || ||||||| Sbjct 5439 ACGAGACCGTGCGATCAGCTCGAAGTTATTCAGAGTCACCAA 5480 Score = 196 bits (216), Expect = 1e-47 Identities = 144/164 (88%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401 |||||||||||||||||||||||||| |||||||| ||| || ||||| ||| || | Sbjct 5606 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTG-GGTACAATCTAAGGA 5664 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGA 460 || ||||||||||||||||||| ||||| ||||||| ||| |||| |||| ||| ||| Sbjct 5665 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCGTACTAGACGGCTTGCACTGAGA 5724 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5725 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 5768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509185849856