Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq13914 109 4e-19
seq7792 95.1 1e-14
>seq13914
Length=11729
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458
||||||||||| || || || ||| || ||| | ||||| || ||||| || || |||
Sbjct 8105 TTCAATGCCATTGAAACCATGCCGTGTGTTAAGAGAAAAGCTGACTGGGCGTTGAAGTGG 8046
Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518
|| | | || || || ||||| ||| || | | || ||||| | ||||| |||
Sbjct 8045 ATAAATGACAAAAACGCGACTTTTGGAGAAAGAATCATAGCTTTTGCTGCTGTCGAAGGT 7986
Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578
| || || |||| ||||| || || |||||| | || ||| | || || |||||
Sbjct 7985 ATTTTCTTTTCTGGAAGTTTTGCTGCGATATTTTGGCTTAAAAAAAGGGGCCTAATGCCT 7926
Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
|| ||||| ||||||||||| || |||||| | |||||
Sbjct 7925 GGACTGACTTTCAGCAATGAATTAATATCAAGAGACGA 7888
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 61693 GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTC 61752
|| ||| ||||||| || || | || ||||| |||||| ||||||| |||||||||||
Sbjct 7737 GAAATTATTCGTGACGCCGTTATCATTGAACAAGAATTTTTGACTGATGCTTTGCCCGTA 7678
Query 61753 TCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGT 61812
|| | || || ||||| ||| | ||||| ||||||||||||||| || || |
Sbjct 7677 TCGATGATTGGAATGAACAGTGAATTAATGAAAACGTATATTGAATTTGTAGCTGATAGA 7618
Query 61813 CTGTTGGTCGATTT 61826
|||| || || ||
Sbjct 7617 TTGTTAGTGGAGTT 7604
>seq7792
Length=27931
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 61195 TTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254
|||||| || || | || || || ||||| || ||||||||||| ||||| ||||||
Sbjct 19667 TTCATTTCGCACGTTCTTGCATTTTTCGCCGCATCTGACGGTATCGTGAATGAAAATTTA 19608
Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314
| || || ||| || || || ||| | | || || | | |||||||| || |||
Sbjct 19607 GTCGAGCGCTTCTTTCAAGAAGTTCAAATCCCCGAAGCTAGATTCTTCTACGGATTTCAG 19548
Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374
|| |||| |||||||| || || || ||||||||| | | || || || ||| ||| |
Sbjct 19547 ATCACCATAGAGAATGTTCATTCAGAAATGTACAGTTTATTGATAGACACATACGTCAAG 19488
Query 61375 GA 61376
||
Sbjct 19487 GA 19486
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 61693 GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTC 61752
|| ||| ||||||| || || | |||||||| |||||| |||| || ||||| |||||
Sbjct 19033 GAAATTATTCGTGACGCTGTTGCAATCGAACAAGAATTTTTGACAGAGGCTTTACCCGTA 18974
Query 61753 TCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGT 61812
|| | || || |||||| | | | ||||| | || ||||||||||| || || |
Sbjct 18973 TCGATGATTGGAATGAATAGCGAATTAATGAAGACTTACATTGAATTTGTAGCTGATAGA 18914
Query 61813 CTGTTGGTCGATTTG 61827
||||||| || |||
Sbjct 18913 TTGTTGGTGGAATTG 18899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397178500891040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |