Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq34896 203 6e-50 seq59799 161 2e-37 seq21138 116 7e-24 >seq34896 Length=2021 Score = 203 bits (224), Expect = 6e-50 Identities = 240/324 (74%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||||| || |||||||| | |||| Sbjct 73 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAGCAGTGGGAGCCGACTTGTTCG 132 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | ||| ||| ||||||| Sbjct 133 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCAGTAGCAAGGTTAACC 191 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 || | || ||||| || |||| |||| ||||| |||||| ||||| ||| Sbjct 192 GCATAGGGG-----AGCCGTAGAGAAATCGAGTCTTAATAGGGCGTTTAGTTGCTGGGTA 246 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| | |||||| ||| ||||||||||||| |||||| | ||| Sbjct 247 TAGACCCGAAACCAGGCGATCTATCCATGAGCAGGTTGAAGGTTGGGTAACACTAACTGG 306 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| |||||||||| |||||||| | || |||||||||||||| Sbjct 307 AGGACCGAACCCACTGTCGTTGAAAAGCCAGGGGATGACTTGTGGATAGGGGTGAAAGGC 366 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 |||||| | || |||||| || Sbjct 367 TAATCAAGCCTGGTGATAGCTGGT 390 >seq59799 Length=293 Score = 161 bits (178), Expect = 2e-37 Identities = 195/264 (74%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | || ||| ||||||| Sbjct 1 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCTGTAGCAAGGTTAACC 59 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || |||| |||| |||||| ||||| ||||| || Sbjct 60 GTATAGGGG-----AGCCGCAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGCAGGGTA 114 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | ||||||||||| |||||| | ||| Sbjct 115 TAGACCCGAAACCCGGTGATCTAGCCATGGGCAGGTTGAAGGTTGGGTAACACTAACTGG 174 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||||||||||| || |||||||| || ||||||||| | || | |||||||||||| Sbjct 175 AGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTGGGGGTGAAAGGC 234 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||||||| |||| |||||| || Sbjct 235 CAATCAAACCGGGAGATAGCTGGT 258 >seq21138 Length=1833 Score = 116 bits (128), Expect = 7e-24 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| || ||| Sbjct 2 TAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGCACTGG 61 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| ||||||| ||||||| |||||| |||||| | || |||||||||||||| Sbjct 62 AGGTCCGAACCCACTAACGTTGCAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGGC 121 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||||| |||||||||| || Sbjct 122 TAAACAAACTTGGAAATAGCTGGT 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972210201088