Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq52855 219 3e-55 seq37226 111 1e-22 >seq52855 Length=506 Score = 219 bits (242), Expect = 3e-55 Identities = 123/124 (99%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 477 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 418 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 358 Query 135 TGTA 138 |||| Sbjct 357 TGTA 354 >seq37226 Length=1724 Score = 111 bits (122), Expect = 1e-22 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||| |||| ||||| | || || Sbjct 1127 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTGAACGTCC 1186 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 || |||| ||| | |||||| |||||| |||||||||||||||||||||||| Sbjct 1187 TCTTTGCAGTTAGACTATCCACTTCTGGTGCAACAAACTCCCATGGTGTGACGGGCGGTG 1246 Query 135 TGTA 138 |||| Sbjct 1247 TGTA 1250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345403562040