Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10066 172 8e-41 >seq10066 Length=2334 Score = 172 bits (190), Expect = 8e-41 Identities = 171/217 (79%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || |||| |||| | ||||| |||| ||||||| ||| | Sbjct 2095 GTACAAAGGGCAGGGACGTAATCGACGCAAGCTAG-TGACTTGCGCCTACTAGGGATT-C 2038 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || ||| | | | || ||||| | | ||||| | ||||| | | |||| | ||| Sbjct 2037 CTGGTTCATGGGGATCA-TTGCAGTCCCCAATCCCAACCACGAAGGAGGTTCAGCGGTTA 1979 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||| || || | || || ||| | | |||||||||||||||||||| Sbjct 1978 CCCGGTCCTCTCGGACAGGGAAA---ACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGG 1922 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||| ||||||||||||||||||||||||||||||| Sbjct 1921 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGC 1885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751558317735