Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10066 183 6e-44 >seq10066 Length=2334 Score = 183 bits (202), Expect = 6e-44 Identities = 214/283 (76%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| | ||| ||| | || || |||||||| ||||||||||| || Sbjct 1175 TGCTCTTAACCGAGTGTCCTGGGTGGCCGGTACGTTCACTTTGAACAAATTAGAGTGCTC 1234 Query 100 AAAGCAGGC-CTTTGCTC--GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||| || || | ||||| |||||||||| || ||||||||| | |||| Sbjct 1235 AAAGCAGGTGCTCCGCGCCTGAATATCACAGCATGGAATGATGGAATAGGACCT-CGGTC 1293 Query 157 CTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||| ||||| | |||||| ||||||| || || |||||| | | Sbjct 1294 TTATTTTGTTGGTTTTCTGGACCCGAGGTAATGGTTAATAGAGACAGACGGGGGCATTCG 1353 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 || | | |||||||||||||||||| ||||| ||| ||||||||||| | Sbjct 1354 TACTGCGACGCTAGAGGTGAAATTCTTGGACCGTCGCAAGACGAACAACTGCGAAAGCAT 1413 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||| |||||||||||||||| ||||||||||||| || Sbjct 1414 TTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 1455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914645123392