Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq47382 149 3e-33 seq22284 123 1e-25 >seq47382 Length=596 Score = 149 bits (164), Expect = 3e-33 Identities = 111/130 (85%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||| ||||||||| ||| |||||||| Sbjct 138 AGAGCGTACACGTTGGGACCCGAAAGATGGTGACCTATGCCTGGCCAGGACGAAGCCAGG 197 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| |||||||||| ||||||| ||||| ||||||||||||||||| | |||||| Sbjct 198 GGAAACCCTGGTGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCGGAGTTGGGT 257 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 258 ATAGGGGCGA 267 >seq22284 Length=545 Score = 123 bits (136), Expect = 1e-25 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||||||||| | ||||||| ||||||| Sbjct 343 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGCGGGAGGTAAACTCCTTCTAAGGCTAAAT 402 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | |||||||||||| ||||||| | || ||||| ||||||| |||||| | Sbjct 403 ACCGCCACGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGTTGAAAAGAACTTTGAAG 462 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || ||||||| Sbjct 463 AGAGAGTTCAAGAGTGCGTGAAA 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078699507950