Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq37226 105 6e-21 seq47820 86.0 6e-15 seq46479 82.4 7e-14 >seq37226 Length=1724 Score = 105 bits (116), Expect = 6e-21 Identities = 89/108 (82%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||||||| ||||||||| |||||||||||| |||| Sbjct 364 GGTGGATGCCTTGGCAGTCAGAGGCGAAGAAAGACGTGATAGCCTGCGAAAAGCTCCGGG 305 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || |||| ||| ||||||||| |||| || |||||||| ||||| Sbjct 304 GAGGCGGCAAATATCCATTGATCCGGAGATGTCTGAATGGGGGAACCC 257 >seq47820 Length=228 Score = 86.0 bits (94), Expect = 6e-15 Identities = 134/189 (71%), Gaps = 17/189 (9%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||||||||||| ||| || ||||||| |||||||||| ||| |||||| |||| || Sbjct 221 ACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG 162 Query 66 GGGATTGGCACATACGAA---TTGATCCGTAGATATCCGAATGGGGCAACCCGATAT-AT 121 | || | ||| ||| |||| ||| ||| ||||||||||| ||||| | | | Sbjct 161 GCGA---GGTGATATGAACCTTTGACCCGGCGATTTCCGAATGGGGAAACCCAGTGTGTT 105 Query 122 TGGAGATA-TATCATAACGCTA---------GGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | || | | |||||| || | | | |||||||| ||||||||||||| Sbjct 104 TCGACACATTATCATTACATGAATACATAGTGTAATGAGGCGAACCGGGGGAACTGAAAC 45 Query 172 ATCTAAGTA 180 ||||||||| Sbjct 44 ATCTAAGTA 36 >seq46479 Length=407 Score = 82.4 bits (90), Expect = 7e-14 Identities = 86/112 (77%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||||||||||| ||| || ||||||| |||||||||| ||| ||||||||||| || Sbjct 187 ACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGAAAAGCGCCG 246 Query 66 GGGATTGGCACATACGAA---TTGATCCGTAGATATCCGAATGGGGCAACCC 114 | || | ||| ||| |||| ||| ||| ||||||||||| ||||| Sbjct 247 GCGA---GGTGATATGAACCTTTGACCCGGCGATGTCCGAATGGGGAAACCC 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476519954649