Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq37225 414 3e-113 seq48292 233 5e-59 seq57402 230 6e-58 seq51550 224 3e-56 seq51724 221 3e-55 seq60010 80.6 7e-13 seq60542 75.2 3e-11 >seq37225 Length=1400 Score = 414 bits (458), Expect = 3e-113 Identities = 333/401 (83%), Gaps = 1/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| Sbjct 480 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTT 421 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||| ||||||||||||||||||||| |||||| | | || | | |||||||||| Sbjct 420 AATCGGATTTACTGGGCGTAAAGCGTGCGTAGGCGGCTAATTGAGTCGGATGTGAAATCC 361 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 ||| ||||||| ||||||||||||| | |||| |||||||||| ||||| ||| Sbjct 360 CCGAGCTTAACTTGGGAATTGCATTCGATACTGGTTAGCTAGAGTGTGGGAGAGGATGGT 301 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| ||||||| |||||||||||||| || |||||||| ||| ||||||||||| Sbjct 300 AGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGC 241 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 |||| |||| ||||||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 240 AGCCATCTGGCCTAACACTGACGCTGAGGTACGAAAGCATGGGGAGCAAACAGGATTAGA 181 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG-GGATTTACTTCCTTG 368 ||||||||||||||| ||| |||||||| || ||||| ||||| ||| || Sbjct 180 TACCCTGGTAGTCCATGCCGTAAACGATGTCTACTAGCCGTTGGTCTCTTTGAGGGATTA 121 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || |||||||||| |||| ||||||||||||| ||| Sbjct 120 GTGGCGCAGCTAACGCGATAAGTAGACCGCCTGGGGAGTAC 80 >seq48292 Length=319 Score = 233 bits (258), Expect = 5e-59 Identities = 191/231 (83%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 180 AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAA 239 |||||||||| |||||||| ||||||| |||||||||||||| || |||||||| ||| Sbjct 10 AGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGG 69 Query 240 TGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 |||||||||| ||||||||| || ||||||||||| | ||||||||||||||||||| Sbjct 70 TGGCGAAGGCGGCCCCCTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAA 129 Query 300 CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAAC-TAGTTGTTGGGGATT 358 ||||||||||||||||||||||||||||| |||||||| || || | | |||| | | Sbjct 130 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCCCT 189 Query 359 TACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | | | | | || ||||||||||| |||| ||||||||||||| ||| Sbjct 190 TGAGGCGTGGCTTCCGGAGCTAACGCGTTAAGTCGACCGCCTGGGGAGTAC 240 >seq57402 Length=196 Score = 230 bits (254), Expect = 6e-58 Identities = 170/196 (87%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 43 CGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGG 102 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 196 CGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGG 137 Query 103 CGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTG 162 ||||| |||| ||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct 136 CGGTTTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTTGAAACTG 77 Query 163 -CACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGA 221 || | || |||| | |||||||||| |||||||| ||||||| |||||||||||||| Sbjct 76 GCAAG-CTTGAGTCTTGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGA 18 Query 222 TATGTGGAGGAACACC 237 || |||||||| ||| Sbjct 17 GATCTGGAGGAATACC 2 >seq51550 Length=196 Score = 224 bits (248), Expect = 3e-56 Identities = 169/196 (86%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 39 CAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCG 98 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct 1 CAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACG 60 Query 99 CAGGCGGT-TGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGT 157 |||||||| ||| ||| | | ||||||||||||||||| |||||||||| |||||| | Sbjct 61 CAGGCGGTCTGT-CAAGTCGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTCGA 119 Query 158 GACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCG 217 |||| | ||||||| | |||||||||| |||||||| ||||||| |||||||||| Sbjct 120 AACTGGCAGGCTAGAGTCTTGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCG 179 Query 218 TAGATATGTGGAGGAA 233 |||| || |||||||| Sbjct 180 TAGAGATCTGGAGGAA 195 >seq51724 Length=192 Score = 221 bits (244), Expect = 3e-55 Identities = 168/193 (87%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 43 CGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGG 102 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 CGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGG 60 Query 103 CGGTTGTGT-AAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACT 161 ||||| ||| ||| | | ||||||||||||||||| |||||||||| |||||| | ||| Sbjct 61 CGGTT-TGTCAAGTCGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTCGAAACT 119 Query 162 -GCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAG 220 ||| | ||||||| | |||||||||| |||||||| ||||||| ||||||||||||| Sbjct 120 GGCAAG-CTAGAGTCTTGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAG 178 Query 221 ATATGTGGAGGAA 233 | || |||||||| Sbjct 179 AGATCTGGAGGAA 191 >seq60010 Length=157 Score = 80.6 bits (88), Expect = 7e-13 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 106 AGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTG 157 >seq60542 Length=151 Score = 75.2 bits (82), Expect = 3e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 58 |||| ||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 49 AGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288818128416