Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq34896 75.2 1e-11 seq21138 75.2 1e-11 >seq34896 Length=2021 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| ||| || || || |||||||||||| ||| | | |||| Sbjct 1189 AAACCGACACAGGTGGTCAGGTCGAGTAGACCAAGGCGCTTGAGAGAACTCTGCTGAAGG 1248 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||| || Sbjct 1249 AACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 1282 >seq21138 Length=1833 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || | || || ||| |||||| ||||||| ||| || | Sbjct 939 CGCAAACCGACACAGGTGGGTAGGAAGAGTATTCTAAGGTGCTTGAGAGAACTCGGGAGA 998 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT 127 ||||||| |||||| |||| | |||||||||||| || | || ||| Sbjct 999 AGGAACTCGGCAAATTGACACCGTAACTTCGGGAGAAGGTGTGCCT 1044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530888003166