Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq34896 188 7e-46 seq21138 134 1e-29 seq33289 107 2e-21 seq59669 102 8e-20 seq45722 102 8e-20 seq33290 102 8e-20 seq60310 98.7 9e-19 seq59840 96.9 3e-18 seq59236 96.9 3e-18 >seq34896 Length=2021 Score = 188 bits (208), Expect = 7e-46 Identities = 124/137 (91%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 22 GGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTA 81 |||||||||||| | ||| | || | | || ||| ||||||||||||| ||||||||||| Sbjct 1303 GGGACTTGCTCCCTGAGCGCTTGGCAGCCGCAGAAACCAGGCCGCTGCAACTGTTTATTA 1362 Query 82 AAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGC 141 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1363 AAAACATAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGATGCCTGCCCGGTGC 1422 Query 142 CGGAAGGTTAATTGATG 158 |||||||||||||||| Sbjct 1423 TGGAAGGTTAATTGATG 1439 >seq21138 Length=1833 Score = 134 bits (148), Expect = 1e-29 Identities = 86/94 (91%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 ||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||| |||| Sbjct 1098 GCTGCGACTGTTTATCAAAAACACAGCACTGTGCTAACACGAAAGTGGATGTATACGGTG 1157 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 1158 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 1191 >seq33289 Length=146 Score = 107 bits (118), Expect = 2e-21 Identities = 61/62 (98%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 97 GCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 156 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 GCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 60 Query 157 TG 158 || Sbjct 61 TG 62 >seq59669 Length=140 Score = 102 bits (112), Expect = 8e-20 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 100 AACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 140 AACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 82 >seq45722 Length=171 Score = 102 bits (112), Expect = 8e-20 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | ||| |||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 96 AGCTGAAGCCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGT 155 Query 97 GCAAACACGAAAGTGG 112 |||||||||||||||| Sbjct 156 GCAAACACGAAAGTGG 171 >seq33290 Length=140 Score = 102 bits (112), Expect = 8e-20 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 100 AACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1 AACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 59 >seq60310 Length=172 Score = 98.7 bits (108), Expect = 9e-19 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | | | |||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 77 AGCTGAAGGCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGT 18 Query 97 GCAAACACGAAAGTGGA 113 ||||||||||||||||| Sbjct 17 GCAAACACGAAAGTGGA 1 >seq59840 Length=172 Score = 96.9 bits (106), Expect = 3e-18 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 48 GTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAA 107 |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| Sbjct 107 GTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAA 166 Query 108 AGTGGA 113 |||||| Sbjct 167 AGTGGA 172 >seq59236 Length=170 Score = 96.9 bits (106), Expect = 3e-18 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | || |||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 95 AGCTGAAACCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGT 154 Query 97 GCAAACACGAAAGTGG 112 |||||||||||||||| Sbjct 155 GCAAACACGAAAGTGG 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476519954649