Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq34896 587 2e-165 seq21138 425 1e-116 seq50517 242 9e-62 seq33289 242 9e-62 seq33290 214 5e-53 seq59669 210 6e-52 seq41658 196 1e-47 seq59236 178 3e-42 seq45722 176 1e-41 seq60310 168 2e-39 seq59840 168 2e-39 >seq34896 Length=2021 Score = 587 bits (650), Expect = 2e-165 Identities = 387/427 (91%), Gaps = 1/427 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||||| Sbjct 1627 CGCGGGTACACTGCATCTTCACAGCGATTTCGATTTCACTGAGCCTCTGCTGGAGACAGC 1568 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1567 GCCGCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1508 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1507 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 1448 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 1447 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTT 1388 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | Sbjct 1387 TCGTGTTTGCAGAGTGCTATGTTTTTAATAAACAGTTGCAGCGGCCTGGTTTCTGCGGCT 1328 Query 301 GGCATGAGCTTACGGAGCAAGT-CCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 | || | ||| | ||||||||| || ||||||||| | ||| |||||||||||||||||| Sbjct 1327 GCCAAGCGCTCAGGGAGCAAGTCCCATCACCCTCAGCAGCGTACCTTCTCCCGAAGTTAC 1268 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||| || ||||||||||||||||| | |||||||||||||||||||||| | ||| ||| Sbjct 1267 GGTACCATTTTGCCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCCTTGGTCTACTCGACC 1208 Query 420 CAACCAC 426 ||||| Sbjct 1207 TGACCAC 1201 >seq21138 Length=1833 Score = 425 bits (470), Expect = 1e-116 Identities = 352/427 (82%), Gaps = 11/427 (3%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| |||||||||||| |||||||| Sbjct 1370 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 1311 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1310 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1251 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| || Sbjct 1250 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-GC---- 1196 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1195 ----ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACACCGTATACATCCACTT 1140 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||||||| ||| |||||||||||||| ||||||||||||||| | | ||| || || Sbjct 1139 TCGTGTTAGCACAGTGCTGTGTTTTTGATAAACAGTCGCAGCCCTCATTTCTCTGCGGCC 1080 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTC-ACCGGCGCACCTTCTCCCGAAGTTAC 359 ||| | | ||| | |||||||| | | ||| ||||||||||||||||||| Sbjct 1079 -TCATTGGGCTCCGGTTGTACACCTTCACCTACTAGAGGCACACCTTCTCCCGAAGTTAC 1021 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||| | |||||| ||||||||| ||||||||||||||||| |||| | || |||| || Sbjct 1020 GGTGTCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCACCTTAGAATACTCTTCC 961 Query 420 CAACCAC 426 | |||| Sbjct 960 TACCCAC 954 >seq50517 Length=242 Score = 242 bits (268), Expect = 9e-62 Identities = 145/152 (95%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 152 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 93 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 CTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 33 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||||||||| |||||||||||||||||| Sbjct 32 TTAGGACCGTTATAGTTACGGCCGCCGTTTAC 1 >seq33289 Length=146 Score = 242 bits (268), Expect = 9e-62 Identities = 142/146 (97%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 107 GGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 146 GGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 87 Query 167 AGAGCTTCGCGTTA--GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACA 224 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 AGAGCTTCGCGTTACCGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACA 27 Query 225 CCCTATACGTCCACTTTCGTGTTTGC 250 || ||||||||||||||||||||||| Sbjct 26 CCGTATACGTCCACTTTCGTGTTTGC 1 >seq33290 Length=140 Score = 214 bits (236), Expect = 5e-53 Identities = 132/140 (94%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 110 ATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA 169 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 140 ATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA 81 Query 170 GCTTCGCGTTA--GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227 ||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 GCTTCTCCTTGCGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCG 21 Query 228 TATACGTCCACTTTCGTGTT 247 |||||||||||||||||||| Sbjct 20 TATACGTCCACTTTCGTGTT 1 >seq59669 Length=140 Score = 210 bits (232), Expect = 6e-52 Identities = 131/140 (94%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 110 ATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA 169 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 ATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA 60 Query 170 GCTTCGCGTT--AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227 ||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCTTCTCCCTGAGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCG 120 Query 228 TATACGTCCACTTTCGTGTT 247 |||||||||||||||||||| Sbjct 121 TATACGTCCACTTTCGTGTT 140 >seq41658 Length=1052 Score = 196 bits (216), Expect = 1e-47 Identities = 128/141 (91%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||||| | ||||| ||| |||||||||||| |||||||| |||||||| Sbjct 143 TGCATCTTCACAAACACTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTAGGGCCATCGT 84 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 TACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 24 Query 132 ATTGTTACGGCCGCCGTTTAC 152 || |||||||||||||||||| Sbjct 23 ATAGTTACGGCCGCCGTTTAC 3 >seq59236 Length=170 Score = 178 bits (196), Expect = 3e-42 Identities = 142/170 (84%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 235 CCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCT 294 ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct 170 CCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCT 111 Query 295 TCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACC--CTCACCGGCGCACCTTCTCCCG 352 ||||| || | |||| ||| | ||||||| | |||| ||| |||||||||| Sbjct 110 TCGACTGGTTTCAGCTCCGTCCGCAGGGACTTCACCTACACACCAGCGTGCCTTCTCCCG 51 Query 353 AAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 50 AAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCG 1 >seq45722 Length=171 Score = 176 bits (194), Expect = 1e-41 Identities = 143/171 (84%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 235 CCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCT 294 ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct 171 CCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCT 112 Query 295 TCGACCGGCATGAGCTTACGGAGCAA-GTCCTTCACC--CTCACCGGCGCACCTTCTCCC 351 ||||| ||| | |||| |||| | ||||||| | | || ||| ||||||||| Sbjct 111 TCGACTGGCTTCAGCTCCATCCGCAAGGGACTTCACCTACGCGCCAGCGTGCCTTCTCCC 52 Query 352 GAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 |||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 51 GAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCG 1 >seq60310 Length=172 Score = 168 bits (186), Expect = 2e-39 Identities = 146/177 (82%), Gaps = 12/177 (7%) Strand=Plus/Plus Query 234 TCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATC 293 |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct 1 TCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATC 60 Query 294 TTCGACCGGCATGAGCT---TACG-GAGCAAGTCCTTCACCCTCACCG---GCGCACCTT 346 |||||| | | | |||| | || ||| | ||||||| |||| ||| |||| Sbjct 61 TTCGACTGCCTTCAGCTCCATCCGCGAG---GGACTTCACC--TACCGACAGCGTGCCTT 115 Query 347 CTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGC 403 ||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| Sbjct 116 CTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGC 172 >seq59840 Length=172 Score = 168 bits (186), Expect = 2e-39 Identities = 141/172 (82%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 234 TCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATC 293 |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct 172 TCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATC 113 Query 294 TTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACC--CTCACCGGCGCACCTTCTCCC 351 |||||| | | |||| ||| | ||||||| | | | ||| ||||||||| Sbjct 112 TTCGACTGATTTCAGCTCCACCCGCAGGGGCTTCACCTACATATCAGCGTGCCTTCTCCC 53 Query 352 GAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGC 403 |||||||||| || ||||||||||||||||| ||||||||||||||||||| Sbjct 52 GAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260035589568