Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10066 260 2e-67 >seq10066 Length=2334 Score = 260 bits (288), Expect = 2e-67 Identities = 212/250 (85%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1945 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 1886 Query 72 CCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CA 129 ||| | ||| ||||||| ||| | |||||||||||||| ||| || || | Sbjct 1885 -CTC--TTTGTCATGCGGCTGGACGCCGCTTGTCCCTCTAAGAAG--AGCGACGGACGGA 1831 Query 130 T-AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | | | |||||||||||| || |||||||||||||||||||||||||||||| Sbjct 1830 TAAAACCCGTCGCCTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 1771 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1770 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTC 1711 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 1710 TCAATCTGTC 1701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796332004749