Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq59895 280 3e-73 seq59682 196 8e-48 seq55195 194 3e-47 seq50959 194 3e-47 seq59696 185 1e-44 seq53383 181 2e-43 seq59777 178 2e-42 seq21316 149 1e-33 seq13107 105 1e-20 seq26929 95.1 2e-17 seq41657 73.4 7e-11 >seq59895 Length=506 Score = 280 bits (310), Expect = 3e-73 Identities = 221/266 (83%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 494 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCC 435 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | || ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 434 TGTTGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 375 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||| |||||||||||||| ||||||||||||| | |||||||||||||||| Sbjct 374 GACACCGAAGGATCAAAAA--------GCTATGAACGCTTTTCCGCCACAAGCCAGTTAT 323 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 || |||||||||||||||| ||||||| || | ||| | | | | |||||||||||| Sbjct 322 CCATGTGGTAACTTTTCTGACACCTCTTGCTTAAAACTCTTAAAGCCAAAAGGATCGATA 263 Query 269 GGCCACACTTTCATGGTTTGTATTCA 294 ||| ||||| || ||||||| Sbjct 262 AGCCGTGCTTTCGGAGTCCGTATTCA 237 >seq59682 Length=137 Score = 196 bits (216), Expect = 8e-48 Identities = 125/136 (92%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 |||||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 137 CAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATC 78 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 77 AAAAAGCGCCGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTT 18 Query 223 TTCTGGCACCTCTAGC 238 ||||| ||||||| || Sbjct 17 TTCTGACACCTCTTGC 2 >seq55195 Length=137 Score = 194 bits (214), Expect = 3e-47 Identities = 125/137 (91%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 |||||||||||||||||| | ||||||||||||||| |||||| ||||| |||||||| Sbjct 137 ACCCAGCTCACGTTCCCTGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCG 78 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 77 CAATGATATGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGC 18 Query 192 TGCCACAAGCCAGTTAT 208 |||||||||||||||| Sbjct 17 CGCCACAAGCCAGTTAT 1 >seq50959 Length=137 Score = 194 bits (214), Expect = 3e-47 Identities = 125/137 (91%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 TCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTG 60 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | ||||| ||||||||| |||||| ||||| |||||||| ||||||||||||||||| Sbjct 61 TAGGTGGGGGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCCGA 120 Query 151 CATCGAAGGATCAAAAA 167 ||||||||||||||||| Sbjct 121 CATCGAAGGATCAAAAA 137 >seq59696 Length=137 Score = 185 bits (204), Expect = 1e-44 Identities = 117/127 (92%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 ||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 134 CGAATACTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 75 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 74 TATGACCGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 15 Query 238 CCTCAAA 244 | | ||| Sbjct 14 CTTAAAA 8 >seq53383 Length=137 Score = 181 bits (200), Expect = 2e-43 Identities = 115/125 (92%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 137 AATACTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 78 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 77 TGAACGCTGGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 18 Query 240 TCAAA 244 | ||| Sbjct 17 TAAAA 13 >seq59777 Length=137 Score = 178 bits (196), Expect = 2e-42 Identities = 112/121 (93%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 124 CTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 135 CTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAA 76 Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAA 243 |||||| | ||||||||||||||||||||||||||||||||||| ||||||| || | || Sbjct 75 CGCTTGCCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAA 16 Query 244 A 244 | Sbjct 15 A 15 >seq21316 Length=3581 Score = 149 bits (164), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||| Sbjct 2567 GGTCGTCAGTAGGGTAAAACTAAACTGTCTGACGACGGTCTAAACCCAGCTCACGTTCCC 2508 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| || ||||| ||||| ||||||||| Sbjct 2507 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTTCTTCGCAATGATGGGAAGAGCC 2448 Score = 78.8 bits (86), Expect = 2e-12 Identities = 75/95 (79%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 258 ||||||||||||||||||||| ||||||| ||||||| ||| || | | || | || Sbjct 2451 AGCCAGTTATCCCTGTGGTAAATTTTCTGACACCTCTTACCTGAACTCTTGA-ATCCAAA 2393 Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||||| ||||| || ||||||| Sbjct 2392 AGGATCGATAGGCCGTGCTTTCGCAGTCTGTATTC 2358 >seq13107 Length=4359 Score = 105 bits (116), Expect = 1e-20 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct 4329 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGACTAAACCCAGCTCACGGTCCC 4270 Query 89 TATTAGTGGGTGAACA 104 | | ||||||||||| Sbjct 4269 TGTAGGTGGGTGAACA 4254 >seq26929 Length=340 Score = 95.1 bits (104), Expect = 2e-17 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252 ||||||||||||||||||||||||||||||||||| ||||||| || | ||| | | Sbjct 3 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAAACTCTTAAA 62 Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | |||||||||||||||| ||||| || ||||||| Sbjct 63 GCCAAAAGGATCGATAGGCCGTGCTTTCGCAGTCCGTATTCA 104 >seq41657 Length=338 Score = 73.4 bits (80), Expect = 7e-11 Identities = 114/162 (70%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| || ||||| | || Sbjct 160 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 101 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | ||| || | | ||| || ||||||||||||| | |||| | | Sbjct 100 CTTGGGACCTACTTCAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 44 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||| ||||||| ||||| | | |||| |||||||| Sbjct 43 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853881985824