Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq41658 266 5e-69 seq41657 266 5e-69 >seq41658 Length=1052 Score = 266 bits (294), Expect = 5e-69 Identities = 218/265 (82%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70 |||| |||||||||| |||||| |||||| |||| |||||||| ||| || |||| Sbjct 871 TTCGCGCTTAGATGCTTTCAGCGCTTATCTATTCCCGACTTAGCTACCCGGCAATGCCAC 812 Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130 |||| ||||| ||| |||||||||| ||||| ||||||||||||||||| | ||| Sbjct 811 TGGCGTGACAACCGGTACACCAGAGGTCAGTCCACTCCGGTCCTCTCGTACTAGGAGCAG 752 Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190 | || |||||| |||| |||||||| | |||||||||| ||||||||| ||||||| || Sbjct 751 CCCCCCTCAAACTTCCAACGCCCACTGCAGATAGGGACCAAACTGTCTCACGACGTTTTG 692 Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 |||||||||| ||| || |||||| ||||||||||| |||||||||||| || |||| Sbjct 691 AACCCAGCTCACGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGC 632 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 ||||||||| || |||||||||||| Sbjct 631 CCCAGGATGTGATGAGCCGACATCG 607 >seq41657 Length=338 Score = 266 bits (294), Expect = 5e-69 Identities = 218/265 (82%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70 |||| |||||||||| |||||| |||||| |||| | |||||| || || |||| | Sbjct 322 TTCGTGCTTAGATGCTTTCAGCACTTATCTTTTCCGCATTTAGCTACCGGGCAATGCCAT 263 Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130 ||||| ||||| | |||||| | | ||||| ||||||||||||||||| | ||| Sbjct 262 TGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAG 203 Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190 | || ||||| | ||| |||||||| | |||||||||||||||||||| ||||||||| Sbjct 202 CCCCCCTCAATTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTA 143 Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 |||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||| Sbjct 142 AACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGC 83 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 ||||||||| || |||||||||||| Sbjct 82 CCCAGGATGTGATGAGCCGACATCG 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780341402244