Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq37225 381 1e-103 seq55102 360 5e-97 seq50610 212 2e-52 seq59757 206 6e-51 seq57103 203 8e-50 seq60010 89.7 1e-15 seq58643 86.0 2e-14 seq60542 84.2 5e-14 seq53701 80.6 7e-13 seq43146 80.6 7e-13 >seq37225 Length=1400 Score = 381 bits (422), Expect = 1e-103 Identities = 336/415 (81%), Gaps = 8/415 (2%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||||| ||||||||||||| |||||||||||||||| |||||| || | || Sbjct 538 GTGCTTTACAACCATAAGGCCTTCTTCACACACGCGGCATGGCTGGATCAGGGTTCCCCC 597 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 598 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 657 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||| | ||||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct 658 GTGTGGCGGATCATCCTCTCAGACCCGCTACAGATCGTCGCCTTGGTAGGCCTTTACCCC 717 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||||||||||||| | | || ||||| ||| | ||| |||||| ||||| || Sbjct 718 ACCAACTAGCTAATCCGACTTAGGCTCATCTATTAGCGCAAGGTCCGAAGATCCCCTGCT 777 Query 241 TT-GGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATC 299 || | | |||| |||||||||||||| || |||| | ||| |||||| | | Sbjct 778 TTCTCCCGTAGGACG-TATGCGGTATTAGCATCCCTTTCGAAATGTTGTCCCCCACTAAT 836 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 || ||| |||| | |||||||||||||||||| | | || || ||||| ||| Sbjct 837 AGCCAGATTCCTAAGTATTACTCACCCGTCCGCCGC---TAAGATCAGTAGCAA---GCT 890 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| | ||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 891 ACCTCTCTCCGCTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCAATCTGAG 945 >seq55102 Length=237 Score = 360 bits (398), Expect = 5e-97 Identities = 208/214 (97%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 218 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 159 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 99 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 98 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCATTACCCC 39 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGAT 214 || |||||||||||||||||||| |||| ||| Sbjct 38 ACCTACTAGCTAATCCCATCTGGGCACATCTGAT 5 >seq50610 Length=159 Score = 212 bits (234), Expect = 2e-52 Identities = 141/157 (90%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 182 CCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTT 241 || |||||||||||||||||||| |||| ||| | |||||||||||||||||| ||| Sbjct 157 CCTACTAGCTAATCCCATCTGGGCACATCTGATGGCATGAGGCCCGAAGGTCCCCCACTT 98 Query 242 TGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAG 301 ||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 97 TGGTCCGAAGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAG 38 Query 302 GCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCG 338 |||||||||||||||||||||||||||||||| |||| Sbjct 37 GCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCG 1 >seq59757 Length=165 Score = 206 bits (228), Expect = 6e-51 Identities = 132/144 (92%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 271 ACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCC 330 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 ACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCC 106 Query 331 GCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGG 390 ||| |||| | || ||| |||||||| ||| | | | ||| ||||||||||||||||||| Sbjct 105 GCCGCTCGCCGGCAAAGTAGCAAGCTACTTTCCGCTGCCGCTCGACTTGCATGTGTTAGG 46 Query 391 CCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||||| Sbjct 45 CCTGCCGCCAGCGTTCAATCTGAG 22 >seq57103 Length=163 Score = 203 bits (224), Expect = 8e-50 Identities = 133/144 (92%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 271 ACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCC 330 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 163 ACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCC 104 Query 331 GCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGG 390 ||| ||||||| | || |||||||| | | |||||||| ||||||||||||||||||| Sbjct 103 GCCGCTCGTCA-CCCAGGAGCAAGCTCCCT-GTGTTACCGCTCGACTTGCATGTGTTAGG 46 Query 391 CCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||||| Sbjct 45 CCTGCCGCCAGCGTTCAATCTGAG 22 >seq60010 Length=157 Score = 89.7 bits (98), Expect = 1e-15 Identities = 49/49 (100%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATC 49 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 49 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATC 1 >seq58643 Length=137 Score = 86.0 bits (94), Expect = 2e-14 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCA 47 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCA 137 >seq60542 Length=151 Score = 84.2 bits (92), Expect = 5e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGC 46 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGC 151 >seq53701 Length=321 Score = 80.6 bits (88), Expect = 7e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 368 CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 321 CCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 275 >seq43146 Length=268 Score = 80.6 bits (88), Expect = 7e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 368 CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 CCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221658871104