Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10066 181 2e-43 >seq10066 Length=2334 Score = 181 bits (200), Expect = 2e-43 Identities = 234/312 (75%), Gaps = 12/312 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78 || |||||| || |||||||||||| | | | | ||| | | || || ||||||| Sbjct 1792 GAACGAGACTCTAGCCTGCTAAATAGGC-GACGGGTTTTATCCGTCCGTCGCTCTTCTTA 1850 Query 79 GAGGGACTATCGGC-TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||| | |||| || ||||| ||| | ||| |||||||||||||||||||||| Sbjct 1851 GAGGGACAAGCGGCGTCCAGCCGCATGACAAA--GAG-CAATAACAGGTCTGTGATGCCC 1907 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||| ||||||||||||||||||||||||| || || || || | || || Sbjct 1908 TTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGT---TTTCCCTGT 1964 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||| | |||||| | | || ||| ||||| | ||||| | | | |||||| | Sbjct 1965 CCGAGAGGACCGGGTAA-CCGCTGAACCTCCTTCGTGGTTGGGATTGGGGACTGCAATGA 2023 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 | | | | ||| |||||| ||||||| |||| |||| ||| |||| |||||||||| Sbjct 2024 -TCCCCATGAACCAGGAATCCCTAGTAGGCGCAAGTCACTAGCTTGCGTCGATTACGTCC 2082 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 2083 CTGCCCTTTGTA 2094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946625722112