Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq21138 475 1e-131 seq34896 405 2e-110 seq59799 215 2e-53 seq50171 170 6e-40 seq49542 147 7e-33 seq31560 138 4e-30 >seq21138 Length=1833 Score = 475 bits (526), Expect = 1e-131 Identities = 389/465 (84%), Gaps = 7/465 (2%) Strand=Plus/Plus Query 32 GTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTG 91 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 1 GTAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGCACTG 60 Query 92 GAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGG 151 |||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||| Sbjct 61 GAGGTCCGAACCCACTAACGTTGCAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 120 Query 152 CTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTA 211 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 121 CTAAACAAACTTGGAAATAGCTGGTTCTCCTCGAAAACTATTTAGGTAGTGCCTCATGTA 180 Query 212 TCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATT 271 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 181 TCACTGACGGGGGTAAAGCACTGTTATGGCTAGGGGGTCATCGCGACTTACCAAACCATG 240 Query 272 GCAAACTCCGAATGCGCATC-AGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCC 330 |||||||| |||| | | || ||| | | ||||| || | ||||||||| |||| Sbjct 241 GCAAACTCTGAATAC-CGTCAAGTGCGAGCATGGGAGACAGTCCTGGGGTGCTAACGTCC 299 Query 331 GTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGA-CAGCTAAGTT 389 | | ||||| || || || ||| | |||||| ||| |||||| || ||||| Sbjct 300 TGGGACAAGAGGGAAACAACCCAGACCGCCGTCTAAGGTCCC-AAATGATCAATTAAGTG 358 Query 390 AAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCAT 449 || ||||| || || || ||||||| ||||||||||||| |||||||||| |||| Sbjct 359 GAA--AACGAGGTGGGAAGGCATAGACAGCCAGGATGTTGGCTTAGAAGCAGCCA-TCAT 415 Query 450 TTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGA 494 ||||||| |||||| |||||||| |||||| ||| ||| ||| Sbjct 416 TTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGTCCTGCGCGGA 460 >seq34896 Length=2021 Score = 405 bits (448), Expect = 2e-110 Identities = 384/483 (80%), Gaps = 8/483 (2%) Strand=Plus/Plus Query 1 TCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||| || |||||| ||| ||||||| |||||||||||||| | |||||| ||| Sbjct 214 TCGAGTCTTAATAGGGCGTTTAGTTGCTGGGTATAGACCCGAAACCAGGCGATCTATCCA 273 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || |||| ||||||| |||||||| ||||||| ||||||||||| |||||||| Sbjct 274 TGAGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCCACTGTCGTTGAAAAG 333 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||||||| ||||| ||||||||||||||||| ||| | ||| |||||||||||| Sbjct 334 CCAGGGGATGACTTGTGGATAGGGGTGAAAGGCTAATCAAGCCTGGTGATAGCTGGTTCT 393 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | |||||| |||||||||||| ||||| | | || ||||| ||||||||||||||||| Sbjct 394 CCCCGAAAGCTATTTAGGTAGCGCCTCGGACGAAT-ACCATAGGGGGTAGAGCACTGTTT 452 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 |||||||||||||| |||||||||||||| |||||||||||||| | || ||| | Sbjct 453 CGGCTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCTATGAGTACT 512 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | |||||| || ||||||||| |||||| | |||||| || ||||| ||| Sbjct 513 ATC-CGGGAGACAGACTGCGGGTGCTAACGTCCGTAGTCAAGAGGAAAACAATCCAGACC 571 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||||||| |||| | || ||||| | ||||| || || || ||||| Sbjct 572 GCCAGCTAAGGCCCCAAAATCATAGTTAAGTGGGA--AACGATGTGGGAAGGCATAGACA 629 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||| Sbjct 630 GCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTC 688 Query 478 GAG 480 ||| Sbjct 689 GAG 691 >seq59799 Length=293 Score = 215 bits (238), Expect = 2e-53 Identities = 172/206 (83%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||| | || || |||| ||||||||||||| |||||||| |||| Sbjct 83 CGAGTCTTAACTGGGCGTTAAGTTGCAGGGTATAGACCCGAAACCCGGTGATCTAGCCAT 142 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||||| ||||||| ||||||| |||||||||||||||| Sbjct 143 GGGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 202 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| ||||| | |||||||||||| || ||||| ||| ||||||||||||| Sbjct 203 TAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTC 262 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC 206 |||||| |||||||||||| ||||| Sbjct 263 CCCGAAAGCTATTTAGGTAGCGCCTC 288 >seq50171 Length=329 Score = 170 bits (188), Expect = 6e-40 Identities = 203/271 (75%), Gaps = 7/271 (3%) Strand=Plus/Plus Query 212 TCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATT 271 ||| | ||||||||||||||||||| |||||||||| ||| || |||||||| || | Sbjct 1 TCATCTTCGGGGGTAGAGCACTGTTTCGGCTAGGGGGCCATCCCGGCTTACCAACCCGAT 60 Query 272 GCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAG--TGAGGGCATGGGTGCTAAGGTC 329 ||||||| ||||| | | | | ||| | |||||| | ||| ||||||||| ||| Sbjct 61 GCAAACTACGAATACCGAAGAATGTTATCACGGGAGACACACGGC--GGGTGCTAACGTC 118 Query 330 CGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTT 389 ||| ||||| || || || ||| ||||||||| ||| || | | | ||||| Sbjct 119 CGTCGTGAAGAGGGAAACAACCCAGACCGCCAGCTAAGGTCCCAAAGTCATGGTTAAGTG 178 Query 390 AAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCAT 449 | ||||| || || || ||||||| ||||||||||||| |||||||||| |||| Sbjct 179 GGA--AACGATGTGGGAAGGCACAGACAGCCAGGATGTTGGCTTAGAAGCAGCCA-TCAT 235 Query 450 TTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||||| |||||| |||||||| |||||| Sbjct 236 TTAAAGAAAGCGTAATAGCTCACTGGTCGAG 266 >seq49542 Length=137 Score = 147 bits (162), Expect = 7e-33 Identities = 115/136 (85%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 144 GTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||||| || ||||| ||| ||||||||||||| |||||| |||||||||||| || Sbjct 1 GTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGC 60 Query 204 CTCAAGTAT-CACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTAC 262 ||| | || || | ||||||||||||||||||| |||||||||||||| |||||||| Sbjct 61 CTCGTGAATTCATCTTCGGGGGTAGAGCACTGTTTCGGCTAGGGGGTCATCCCGACTTAC 120 Query 263 CAAACCATTGCAAACT 278 ||| || |||||||| Sbjct 121 CAACCCGATGCAAACT 136 >seq31560 Length=137 Score = 138 bits (152), Expect = 4e-30 Identities = 113/136 (83%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 144 GTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||||| || ||||| ||| ||||||||||||| |||||| |||||||||||| || Sbjct 1 GTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGC 60 Query 204 CTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTAC 262 ||| | | ||| | ||||||||||||||||||| |||||||||| ||| || ||||| Sbjct 61 CTCGTGAACTCATCTTCGGGGGTAGAGCACTGTTTCGGCTAGGGGGCCATCCCGGCTTAC 120 Query 263 CAAACCATTGCAAACT 278 ||| || |||||||| Sbjct 121 CAACCCGATGCAAACT 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688575612416