Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq21316 327 4e-87 seq20031 291 3e-76 seq8706 266 1e-68 seq9939 232 2e-58 seq13107 188 2e-45 seq52428 170 6e-40 seq57946 167 8e-39 seq11850 143 9e-32 seq26929 138 4e-30 seq59895 129 2e-27 seq4876 129 2e-27 seq41399 125 2e-26 seq25435 122 3e-25 seq16599 118 3e-24 >seq21316 Length=3581 Score = 327 bits (362), Expect = 4e-87 Identities = 343/448 (77%), Gaps = 26/448 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| || | ||||||| |||| |||| ||||| |||||||||||||| Sbjct 2324 CTTTTGCTCTAAGGGGGGTTTCTGTCCTCCCTGAGCTGGCCTTACGACACCTGCGTTATC 2265 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||| | ||||||||| ||||||||||||| | || |||| ||| ||| |||| Sbjct 2264 GTTTGACAGATTTACCGCCCCAGTCAAACTCCCCACCCGGCACTGTCCTCAGCCCAGATC 2205 Query 127 G-----GCCCGCGAAGGAC--------CTTAACGCCAGAA---AATGGTCGGT-GAAGAC 169 | ||| |||| | | ||| |||| |||| ||| | | | |||| Sbjct 2204 GTGACCGCCTGCGAGAGGCAGGGGTCGCTTGACGCGAGAACGCAATCTCCCGAAGGAGAC 2145 Query 170 CAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC 229 | |||||||||| | ||||| || || || | ||||||||| |||| || | Sbjct 2144 AACTTCCGCTTCACCAAGTAAGTGAAGCGACCATGAAAGTAGTGGTACTTCAT---CGTC 2088 Query 230 GAA-----ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG 284 | | || ||| |||||| |||||||||| | |||| | ||||| | || ||||| Sbjct 2087 GGACTTCCACC-CTCACACTTAGGCTACACCTCTTATGTCACTCCACAATGCCGAACTAG 2029 Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 ||||||||||||||||| |||||||||| ||||| ||| |||||||||| |||| | Sbjct 2028 AGTCAAGCTCAACAGGGCCTTCTTTCCCTGCTGACGAAACCAGGCCCGTTCCCCTGGCAG 1969 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 ||| ||||||||||||||| |||||||||||||||| |||||||||||||| || ||||| Sbjct 1968 TGGGTTCGCTAGATAGTAGGTAGGGACAGTGGGAATGTCGTTAATCCATTCGTGTGCGTC 1909 Query 405 ACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||| || Sbjct 1908 ACTAATTAGATGACGAGGCATTTGGTTA 1881 >seq20031 Length=264 Score = 291 bits (322), Expect = 3e-76 Identities = 166/169 (98%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 264 TAGGGACAGTGGGAATCTCGTTAATCCATTCGTGCGCGTCACTAATTAGATGACGAGGCA 205 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 204 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGTTGAATTT 145 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 144 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCACCA 96 >seq8706 Length=6074 Score = 266 bits (294), Expect = 1e-68 Identities = 326/443 (74%), Gaps = 33/443 (7%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||| ||||||| ||| |||| |||||||||||| ||||||| Sbjct 2133 CTTTTGCTCTACGGGAGGTTTCTGTCCTCACTGAGCTGGCCTTAGGACACCAGCGTTATC 2192 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||| | ||||||||||| | | || |||| ||| ||||||| Sbjct 2193 GTTCGACAGATGTACCGCCACTTTCAAACTCCCCATCCGGCATTGTCCTCAGCCCGGATA 2252 Query 127 G-----GCCCGCGA--AGGACC--TTAA----CGCCAGAAAATGGTCGGT-GAAG---AC 169 | ||| |||| || | | || || |||| | || |||| || Sbjct 2253 GCGACCGCCTGCGAGAAGCAGGGGTCAATGGGCGGGAGAACGTAATCTCCCGAAGGAAAC 2312 Query 170 CAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC 229 | ||||| |||| || ||||| || | || || | |||| |||||||| | || Sbjct 2313 GACTTCCGTTTCACCGAGTAAGTGAACAGACCATGAAAGTAG--GTATTTCATTGTCGGA 2370 Query 230 GAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA 289 | || ||||||||||| |||||||||||| | || | ||||| | || | |||||||| Sbjct 2371 GTTGCGCCTCCCACTTATGCTACACCTCTCATGCCACTCCACAATGCCGAATTAGAGTCA 2430 Query 290 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTT 349 ||||| ||||||||||||||||||||||| ||| ||||||| || |||| |||| | Sbjct 2431 AGCTCGACAGGGTCTTCTTTCCCCGCTGACGAAACCAGGCCCGTTTCCCTGGCAGTGGGT 2490 Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct 2491 TCGCTAGATAGTAGGTAGGGACAGTGGGAATTTCGTTAATT--------------ACTAA 2536 Query 410 TTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||| Sbjct 2537 TTAGATGACGAGGCATTTGGCTA 2559 >seq9939 Length=18230 Score = 232 bits (256), Expect = 2e-58 Identities = 190/233 (82%), Gaps = 15/233 (6%) Strand=Plus/Minus Query 208 GTAGTGGTATTTCA--------CTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTC 259 |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct 9380 GTAGTGGTATTTCATTGTCGGGCTTGCGCC-------CTCCCACTTATACTACACCTCTC 9328 Query 260 AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT 319 | |||| | ||||| | || |||| | |||||||||||| ||||||||||||||||||| Sbjct 9327 ATGTCACTCCACAATGCCGAACTAAAATCAAGCTCAACAAGGTCTTCTTTCCCCGCTGAC 9268 Query 320 TCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAA 379 | ||||||||| || | |||| ||||||||||||||| ||||||||||||| | Sbjct 9267 GAAACTTGGCCCGTTCCTCTGTCAGTGGGTTCGCTAGATAGTAGGTAGGGACAGTGGGTA 9208 Query 380 TCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| Sbjct 9207 TCTCGTTAATCCATTCGTGCGCGTCACTAATTAGATGATGAGGTATTTGGCTA 9155 Score = 132 bits (146), Expect = 2e-28 Identities = 86/93 (92%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 ||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||||| | Sbjct 13667 GAGAGTCATAGTTACTCCCGCCGATTACCCGAGCTTCGTTGAATTTCTTCATTTTGACGT 13608 Query 499 TCAGAGCACTGGGCAGAAATCAC-ATTGCGTCA 530 ||||||||||||| ||||||||| ||||||||| Sbjct 13607 TCAGAGCACTGGGAAGAAATCACAATTGCGTCA 13575 >seq13107 Length=4359 Score = 188 bits (208), Expect = 2e-45 Identities = 196/266 (74%), Gaps = 42/266 (16%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA--------CTTGC 226 |||||||| || ||||| || || || | || ||||||||||| ||||| Sbjct 4253 CCGCTTCACCGAGTAAGTGAAGCGACCATGAAAGTTGTGGTATTTCATTGTCGGACTTGC 4194 Query 227 GCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAG 286 ||| ||||||||||| |||||||||||| |||| | ||||| | || ||||||| Sbjct 4193 GCC-------CTCCCACTTATGCTACACCTCTCATGTCACTCCACAATGCCGAACTAGAG 4141 Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346 |||| |||||||||| ||||||||| |||| ||| Sbjct 4140 TCAAACTCAACAGGG---------------------------CCCGTTCCCCTGGCAGTG 4108 Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 | ||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||| Sbjct 4107 GGTTCGCTAGATAGTAGGTAGGGAAAGTGGGAATCTCGTTAATCCATTCGTGCGTGTCAC 4048 Query 407 TAATTAGATGACGAGGCATTTGGCTA 432 | |||||||||||||||||||||||| Sbjct 4047 TTATTAGATGACGAGGCATTTGGCTA 4022 >seq52428 Length=137 Score = 170 bits (188), Expect = 6e-40 Identities = 120/137 (88%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 252 CACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCC 311 ||||||||| |||| | ||||| | || |||||||||||||||||||| ||||||||||| Sbjct 137 CACCTCTCATGTCACTCCACAATGCCGAACTAGAGTCAAGCTCAACAGTGTCTTCTTTCC 78 Query 312 CCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGAC 371 ||||||| ||| |||||||||| |||| |||| ||||||||||||||| ||||||| Sbjct 77 CCGCTGACAAAACCAGGCCCGTTCCCCTGGCAGTGGGTTCGCTAGATAGTAGGTAGGGAC 18 Query 372 AGTGGGAATCTCGTTAA 388 ||||||||||||||||| Sbjct 17 AGTGGGAATCTCGTTAA 1 >seq57946 Length=137 Score = 167 bits (184), Expect = 8e-39 Identities = 119/137 (87%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| |||||||||||| |||| | ||||| | || ||||||||||||||||||||||||| Sbjct 1 TATGCTACACCTCTCATGTCACTCCACAATGCCGAACTAGAGTCAAGCTCAACAGGGTCT 60 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 |||||||| ||||| ||| |||||||||| |||| |||| ||||||||||||||| Sbjct 61 TCTTTCCCTGCTGACGAAACCAGGCCCGTTCCCCTGGCAGTGGGTTCGCTAGATAGTAGG 120 Query 365 TAGGGACAGTGGGAATC 381 ||||||||||||||||| Sbjct 121 TAGGGACAGTGGGAATC 137 >seq11850 Length=2707 Score = 143 bits (158), Expect = 9e-32 Identities = 93/101 (92%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATA--GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||| ||||||||||| ||||||| |||||| |||||||| ||||||| Sbjct 2497 TTAAGAGAGTCATATAGTTACTCCCGCTGTTTACCAGCGCTTCATTGAATTTTTTCACTT 2438 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||| || Sbjct 2437 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCACCA 2397 >seq26929 Length=340 Score = 138 bits (152), Expect = 4e-30 Identities = 103/121 (85%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||| ||||||| |||| |||| |||||||||||||||||||| Sbjct 137 CTTTTGCTCTACGGGAGGTTTCTGTCCTCCCTGAGCTGGCCTTAGGACACCTGCGTTATC 196 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||| ||||||||| ||||||||||| | | || |||| ||| |||||||| Sbjct 197 GTTTGACAGATGTACCGCCCCAGTCAAACTCCCCATCCGGCACTGTCCTCAGCCCGGATC 256 Query 127 G 127 | Sbjct 257 G 257 >seq59895 Length=506 Score = 129 bits (142), Expect = 2e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||| ||||||| |||| |||| |||||||||||||||||||| Sbjct 204 CTTTTGCTCTACGGGAGGTTTCTGTCCTCCCTGAGCTGGCCTTAGGACACCTGCGTTATC 145 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||| || |||||| |||||||||| | | || |||| ||| |||||||| Sbjct 144 GTTTGACAGATGTACCACCCCAGTTAAACTCCCCATCCGGCACTGTCCTCAGCCCGGATC 85 Query 127 G 127 | Sbjct 84 G 84 >seq4876 Length=16052 Score = 129 bits (142), Expect = 2e-27 Identities = 91/104 (88%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 ||| ||||| |||| || | ||||||| || |||| ||| ||||||||||||||||||| Sbjct 10746 CCCTTTCCCCTGGCAGTAGGTTCGCTAAATGGTAGGTAGAAACAGTGGGAATCTCGTTAA 10805 Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||| |||||||||| || |||||||||||||||||||||| Sbjct 10806 TCCATTCGTGCGCGTCACGAAGTAGATGACGAGGCATTTGGCTA 10849 >seq41399 Length=1343 Score = 125 bits (138), Expect = 2e-26 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1343 TAGATAGTAGGTAGGGACAGTGGGAATCTCGTTAATCCATTCGTGCGCGTCACTAATTAG 1284 Query 414 ATGACGAGGCATTTGGCTA 432 |||||||| ||||| |||| Sbjct 1283 ATGACGAGACATTTCGCTA 1265 >seq25435 Length=188 Score = 122 bits (134), Expect = 3e-25 Identities = 119/155 (77%), Gaps = 15/155 (10%) Strand=Plus/Minus Query 166 AGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA---- 221 |||| | |||||||||| || ||||| || || || | |||||||||||||| Sbjct 148 AGACGACTTCCGCTTCACCGAGTAAGTGAAGCGACCATGAAAGTAGTGGTATTTCATTGT 89 Query 222 ----CTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC 277 |||||||| ||||||||||| |||||||||||| |||| | ||||| | | Sbjct 88 CGGACTTGCGCC-------CTCCCACTTATGCTACACCTCTCATGTCACTCCACAATGCC 36 Query 278 GGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312 | |||||||||||||||||||| |||||||||||| Sbjct 35 GAACTAGAGTCAAGCTCAACAGTGTCTTCTTTCCC 1 >seq16599 Length=3641 Score = 118 bits (130), Expect = 3e-24 Identities = 67/68 (99%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 TAGGGACAGTGGGAATCTCGTTAATCCATTCGTGCGCGTCACTAATTAGATGACGAGGCA 60 Query 425 TTTGGCTA 432 |||||||| Sbjct 61 TTTGGCTA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634208594592