Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq55102 174 3e-41 seq37225 156 9e-36 >seq55102 Length=237 Score = 174 bits (192), Expect = 3e-41 Identities = 158/198 (80%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||| | ||||||| ||| || ||||| || | ||||| | |||||| |||| || Sbjct 221 AAAGTACTTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTG 163 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 162 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 103 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 |||| ||||| | | |||||||||| | ||| ||||| | ||||||| ||| ||| Sbjct 102 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCATTA 43 Query 262 CCCCGCCTACTACCTAAT 279 |||| ||||||| ||||| Sbjct 42 CCCCACCTACTAGCTAAT 25 >seq37225 Length=1400 Score = 156 bits (172), Expect = 9e-36 Identities = 150/191 (79%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||| || || ||||| || ||||| | ||||||| |||| | | |||| Sbjct 542 TTTACAA-CCATAAGGCCTTCTTCACACACGCGGCATGGCTGGATCAGGGTTCCCCCCAT 600 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 601 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 660 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| ||| | |||||||||| || ||| ||||| | || ||| |||| ||||||| || Sbjct 661 TGGCGGATCATCCTCTCAGACCCGCTACAGATCGTCGCCTTGGTAGGCCTTTACCCCACC 720 Query 269 TACTACCTAAT 279 |||| ||||| Sbjct 721 AACTAGCTAAT 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068151997248