Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq9686 192 3e-44 >seq9686 Length=37809 Score = 192 bits (212), Expect = 3e-44 Identities = 249/344 (72%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 36346 GCTGATTCTACTGAGGCTATCACCGAGAATGTTCTGCGTACTATGGCAATAACGAACATC 36405 ||||| || |||| || ||||||| || | | || |||| || | |||| | Sbjct 4433 GCTGAATCCTCTGAAGCCATCACCGCAAACATCATCCGAACTACCAACATCATCAACACC 4492 Query 36406 ATTCAGGAGGCGAATCAACATGCAAAACAGCAGATCGCACTGGAGTCACAGAGAACCCAG 36465 ||| ||||| ||||| ||||| |||||||||||||||||||||||||||| || Sbjct 4493 ATTACTGAGGCAAATCAGCATGCCAAACAGCAGATCGCACTGGAGTCACAGAATGCCGCT 4552 Query 36466 GAAGATATCAAAGTGGCTGTTGCGGATGATGATTGTGCTTCACGTCCTGTGCCTGATGTC 36525 | || |||||||||||||||||| |||||||||| || | | |||||||| || Sbjct 4553 AACGACATCAAAGTGGCTGTTGCGAATGATGATTGCTCTCGTCAGCTTGTGCCTGTTGCA 4612 Query 36526 GCTGCTGACCGGTTGCGGAAGTACGCGGACAGTATACGTGCAGGTTCCAACGATGCCGTT 36585 |||||| ||||| ||||| ||||||| |||||| ||||||| | ||| | | ||| | Sbjct 4613 GCTGCTAACCGGCTGCGGCAGTACGCAGACAGTTTACGTGCCAGCACCAGTGGTTCCGAT 4672 Query 36586 ACCGGCGAACCTGCTCGCTGAAACTCCACAGCCAGTTATACCCAATCCTCTGACTTATGG 36645 ||| | |||||| ||||||| || |||||| || || |||| ||| ||||||| Sbjct 4673 TCCGTCAAACCTGACTTCTGAAACGCCCCAGCCAACGATTTCCGATCCGCTGTCTTATGG 4732 Query 36646 GGATAGTCTTAGTTTGAATGTAAGTCTGCTATCAGCACTGGGGC 36689 || ||||| | ||||||| | || | | ||| |||||| Sbjct 4733 GGGCAGTCTGGATCTGAATGTGAACTTGTTGGCTGCATTGGGGC 4776 Score = 192 bits (212), Expect = 3e-44 Identities = 249/344 (72%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 75809 GCTGATTCTACTGAGGCTATCACCGAGAATGTTCTGCGTACTATGGCAATAACGAACATC 75868 ||||| || |||| || ||||||| || | | || |||| || | |||| | Sbjct 4433 GCTGAATCCTCTGAAGCCATCACCGCAAACATCATCCGAACTACCAACATCATCAACACC 4492 Query 75869 ATTCAGGAGGCGAATCAACATGCAAAACAGCAGATCGCACTGGAGTCACAGAGAACCCAG 75928 ||| ||||| ||||| ||||| |||||||||||||||||||||||||||| || Sbjct 4493 ATTACTGAGGCAAATCAGCATGCCAAACAGCAGATCGCACTGGAGTCACAGAATGCCGCT 4552 Query 75929 GAAGATATCAAAGTGGCTGTTGCGGATGATGATTGTGCTTCACGTCCTGTGCCTGATGTC 75988 | || |||||||||||||||||| |||||||||| || | | |||||||| || Sbjct 4553 AACGACATCAAAGTGGCTGTTGCGAATGATGATTGCTCTCGTCAGCTTGTGCCTGTTGCA 4612 Query 75989 GCTGCTGACCGGTTGCGGAAGTACGCGGACAGTATACGTGCAGGTTCCAACGATGCCGTT 76048 |||||| ||||| ||||| ||||||| |||||| ||||||| | ||| | | ||| | Sbjct 4613 GCTGCTAACCGGCTGCGGCAGTACGCAGACAGTTTACGTGCCAGCACCAGTGGTTCCGAT 4672 Query 76049 ACCGGCGAACCTGCTCGCTGAAACTCCACAGCCAGTTATACCCAATCCTCTGACTTATGG 76108 ||| | |||||| ||||||| || |||||| || || |||| ||| ||||||| Sbjct 4673 TCCGTCAAACCTGACTTCTGAAACGCCCCAGCCAACGATTTCCGATCCGCTGTCTTATGG 4732 Query 76109 GGATAGTCTTAGTTTGAATGTAAGTCTGCTATCAGCACTGGGGC 76152 || ||||| | ||||||| | || | | ||| |||||| Sbjct 4733 GGGCAGTCTGGATCTGAATGTGAACTTGTTGGCTGCATTGGGGC 4776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247292336630584