Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq24975 114 2e-23 seq15312 78.8 1e-12 >seq24975 Length=38252 Score = 114 bits (126), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 7/217 (3%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||||||||| | |||| ||| | |||| | |||| || ||||||||||||| || Sbjct 27890 TACAAAGGGCAGAGGCGTAATCAGTACCAGCTA-ACGACTAGCACTTACTAGGAATT-CC 27833 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTAC 121 ||||| ||| | ||||||||| ||| || ||| | || || |||||||||||| Sbjct 27832 TCGTTCAAGGGGCATAATTGCAATCCCCTACCCTCATGAAGAAAAACATTCAAAGATTAC 27773 Query 122 CCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 | ||| || ||| | | | ||| || ||| |||||||||||||| | Sbjct 27772 TAG--CCT--CGTTAAAGACTACAAAGCTCATTTTGCCTCTCAATGTAGCGCGCGTGCAG 27717 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| ||||||||||||| ||||||||||| ||||||| Sbjct 27716 CCCCGAACATCTAAGGGTATCACAGACCTCTTATTGC 27680 >seq15312 Length=40146 Score = 78.8 bits (86), Expect = 1e-12 Identities = 157/223 (70%), Gaps = 21/223 (9%) Strand=Plus/Plus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 ||| ||| |||| |||||| | | | |||| | |||| || |||| | |||||| || Sbjct 27496 TACGAAGCGCAGAGACGTAATTAGTACTAGCTA-ACGACTAGCACTTAGTGGGAATT-CC 27553 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA-------TT---T 111 ||||| ||| ||||||||||| |||||| ||| | | ||| || | Sbjct 27554 TCGTTCAAGGGGCACAATTGCAATCCTCTATCTGCATTAAAAAAAAAAAAAACATTCACT 27613 Query 112 CAAAGATTACCCGGACCT-GTCGGCCAAGGT-GATAGACTCGTTGAATACATCAGTGTAG 169 || ||||||| | ||| || | ||| | || || ||| || | ||| ||||| Sbjct 27614 CACAGATTACTAG--CCTCGTTAG--AAGCTAGAAAG-CTCATTTTGTCTCTCAATGTAG 27668 Query 170 CGCGCGTGCGGCCCAGAACAT--CTAAGGGCATCACAGACCTG 210 |||||||||||||| |||||| |||||||||||||||||||| Sbjct 27669 CGCGCGTGCGGCCCCGAACATCACTAAGGGCATCACAGACCTG 27711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751754029260