Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2644 84.2 9e-14 seq31954 82.4 3e-13 >seq2644 Length=16409 Score = 84.2 bits (92), Expect = 9e-14 Identities = 90/118 (76%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||| | |||||||| | | |||||||| |||| ||| ||||| Sbjct 3336 TTGAGACCCGAAAGATGGTAACCTATGCCTACACAAGGTGAAGCAAGAGAAAA--CTGGT 3279 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | | || || | |||| |||||||| || || ||||||||||||||| Sbjct 3278 GGATGTCTGAAGTCATTTTAACGTGAAAATCGATAATCTGATCTGGGTATAGGGGCGA 3221 >seq31954 Length=43168 Score = 82.4 bits (90), Expect = 3e-13 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||| ||||| | || ||||| | | |||||||||||||||||||||| Sbjct 23144 TTGAGACCCGAAAAATGGTCACCTGTGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 23085 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | || ||||| |||||||| ||| || | ||||||||||||||| Sbjct 23084 GGATATCTGAAGTTATTCTGAGGTGCAAATGGATAATCTGACCTGGGTATAGGGGCGA 23027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079275762200