Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq24975 107 3e-21 seq7367 80.6 4e-13 seq15312 73.4 6e-11 >seq24975 Length=38252 Score = 107 bits (118), Expect = 3e-21 Identities = 150/204 (74%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||| ||||||||||||| ||||||||||| |||||| ||| Sbjct 27736 TCAATGTAGCGCGCGTGCAGCCCCGAACATCTAAGGGTATCACAGACCTCTTATTG-CTC 27678 Query 76 AAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCA-ACCATAGT 133 || || | | || || | | || | |||| | | || | || ||| | Sbjct 27677 --TGTTTCAAAGTGTCAAACACACTTGATCGCATTAAGGAACGTCACAGAAGACAATATT 27620 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | | |||||| ||| || |||||| || |||||||||| |||||| ||||||| Sbjct 27619 CTGT-GTGTTATTTAATAGGCTAGAGTCTCGCTCCTTATCGGAATAAACCAGGCAAATCA 27561 Query 194 CTCCACCAACTAAGAACGGCCATG 217 |||||||||| || ||| ||||| Sbjct 27560 CTCCACCAACCAAAAACATCCATG 27537 >seq7367 Length=1328 Score = 80.6 bits (88), Expect = 4e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 205 AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 66 AAGAACGGCCATGCACCACCATCCACCAAATCAAGAAAGAGCTATCAATCTGTC 13 >seq15312 Length=40146 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/52 (92%), Gaps = 2/52 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACAT--CTAAGGGCATCACAGACCTG 65 ||| ||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 27660 TCAATGTAGCGCGCGTGCGGCCCCGAACATCACTAAGGGCATCACAGACCTG 27711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796539375684