Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04-
06] 33,764 sequences; 352,534,912 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq24975 125 1e-26
seq15312 84.2 4e-14
>seq24975
Length=38252
Score = 125 bits (138), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||| ||||||||||| ||||||||||||| |||| |||||||||||||| ||| ||
Sbjct 27680 GCAATAAGAGGTCTGTGATACCCTTAGATGTTCGGGGCTGCACGCGCGCTACATTGAGAG 27739
Query 174 AGCCAACGAG-TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232
|| ||| || | ||| || ||| || |||||||| | || | | || |
Sbjct 27740 GCAAAATGAGCTTTGTAGTCTTTAACG--AGG-CT-AGTAATCTT-TGAATGTTTTTCTT 27794
Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
|| || ||| | ||||||||||| | ||| |||||||||| ||||||||| || ||
Sbjct 27795 CATGAGGGTAGGGGATTGCAATTATGCCCCTTGAACGAGGAATTCCTAGTAAGTGCTAGT 27854
Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | ||| | |||||||| | ||||||||||||
Sbjct 27855 CGTTAGCTGGTACTGATTACGCCTCTGCCCTTTGTA 27890
>seq15312
Length=40146
Score = 84.2 bits (92), Expect = 4e-14
Identities = 154/219 (70%), Gaps = 14/219 (6%)
Strand=Plus/Minus
Query 121 CAGGTCTGTGATGCCCTTAG--ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCA 178
|||||||||||||||||||| |||||| ||||||||||||||||||| ||| ||| |
Sbjct 27711 CAGGTCTGTGATGCCCTTAGTGATGTTCGGGGCCGCACGCGCGCTACATTGAGAGACAAA 27652
Query 179 ACGAG--TTC-ATC----ACCTTGGC-CGGAAGGTCTGGGT-AATCTTGTTAAACTCTGT 229
| ||| ||| | | | | ||| | || | || || ||| || || | | |
Sbjct 27651 ATGAGCTTTCTAGCTTCTAACGAGGCTAGTAATCTGTGAGTGAATGTTTTT---TTTTTT 27595
Query 230 CGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289
| || ||||||| ||||||||| | | ||| |||||||||| || | |||| ||
Sbjct 27594 TTTAATGCAGATAGAGGATTGCAATTGTGCCCCTTGAACGAGGAATTCCCACTAAGTGCT 27535
Query 290 TGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| | ||| | | |||||||| |||| ||| |||
Sbjct 27534 AGTCGTTAGCTAGTACTAATTACGTCTCTGCGCTTCGTA 27496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946880187392
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |