Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tropilaelaps_20mercedesae_20[genbank_20GCA_5F002081605.1_202017-04- 06] 33,764 sequences; 352,534,912 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq24587 188 2e-45 seq24645 174 5e-41 >seq24587 Length=85576 Score = 188 bits (208), Expect = 2e-45 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||| | |||||||| |||| || || ||||||| | | ||||| ||||||||||| Sbjct 57479 GTATTTATTCCAATAACAAAGCCTCACAAGAGCCTCGCACTGTTATTTTTTGTCACTACC 57420 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||| ||||||||||||| ||| | ||||||||||| ||||||| ||||| Sbjct 57419 TCCCCGTGCCGGCATTGGGTAATTTGGGCGTCCACTGCCTTCCTTATATGTGGTCGCCGT 57360 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||| |||| | ||||||||| ||| ||||| || Sbjct 57359 TTCTCAGGCTCCCTCTCCGGAATCGAATTCTAAAT-CCCGTTACCTGTTACGACCATAGT 57301 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA-AATTTGAATGAA 228 | | || ||||||||| ||| ||||| ||||| |||||| ||| Sbjct 57300 AAACATATAATATACCATCGACAGTGGATAGAGCAGATGCTTTGAAGGAA 57251 >seq24645 Length=268 Score = 174 bits (192), Expect = 5e-41 Identities = 118/131 (90%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTAC-AAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| ||| | || ||||| || | || ||||| ||||||||||| Sbjct 131 GTACTCATTCCAATTACGAAGCCTCATAAGAGTCCCGCATTGTTATTTTTTGTCACTACC 72 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 71 TCCCCGTGCCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGT 12 Query 120 TTCTCAGGCTC 130 ||||||||||| Sbjct 11 TTCTCAGGCTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509890028544