Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28]
66,952 sequences; 97,281,263 total letters
Query= NC_007902.1
Length=52162
Score E
Sequences producing significant alignments: (Bits) Value
seq66829 361 2e-95
seq49942 109 2e-19
seq22547 104 8e-18
seq62471 91.5 5e-14
>seq66829
Length=2846
Score = 361 bits (400), Expect = 2e-95
Identities = 458/627 (73%), Gaps = 2/627 (0%)
Strand=Plus/Minus
Query 23529 GAAACTGCTCTTTGGGATAC-GCCCACTGTTCGAGCAATCCGGCCAGTTCGTTAACCAGC 23587
|||| || ||||| | ||| | ||||||||| ||||| | || |||||||| || ||
Sbjct 2527 GAAATTGTTCTTTAG-ATAGAGACCACTGTTCTAGCAAACACGCTAGTTCGTTCACAAGT 2469
Query 23588 TCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGA 23647
||||||||||||||| | ||||| |||||||| |||| || || || || || || |||
Sbjct 2468 TCCAGCATATCACGGCTGCGAATATGCTTCTGTACCAACTCTAGTAGTGCGACACGCCGA 2409
Query 23648 TGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGA 23707
||||| |||||||| ||||| | ||||| || ||||| ||||| |||||||| || |
Sbjct 2408 TGGGTGAGGATTTCCTCATCGGCTATTGTCGTAATATCTACCAGTGGAAATGCTTGCGTA 2349
Query 23708 TAAACCGTGGCCGCCAATTCTGGCTCAGCAAAACAGTCCAGACAGCGCGTGCTGTACGGA 23767
|| || | || | |||||| || ||||||||| | || | ||||| || |||
Sbjct 2348 TAGACAGACTTTGCTAGTTCTGGTTCCATAAAACAGTCTAACCATTGGGTGCTATAAGGA 2289
Query 23768 TACGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGAATGACCACCGGTAGCTGATCGTTG 23827
|| || || || ||||||||||| || |||||||| || || || |||| | | || |||
Sbjct 2288 TAGGGTGAAGTTGTGCCGTGGTAGAATAGCAGCGGTATCACTACTGGTAACCGGTCATTG 2229
Query 23828 CCCTGTTCTAGATGCCGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCATC 23887
|| || |||||||| ||||||||||| || || | ||| || | || ||||| |||||
Sbjct 2228 CCTTGCTCTAGATGGCGCTGCATCGCCGCCACTGTATAGCGCAATAAGCGAAATACCATC 2169
Query 23888 AGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGACAGTAGACGTAACCATCATGGCCCGTC 23947
|||| ||||| || ||||||||||| || ||||| ||||| || || ||| || |
Sbjct 2168 TGCTTGTCCGGACGACTCTGGTGCTCAATGAGACAATAGACATAGCCCGGATGACCTGCG 2109
Query 23948 GTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCGATAAAT 24007
|| || || |||| || || | ||||||||| ||| ||||| |||||||||||
Sbjct 2108 GTAGTTTTTATCGCATACAGAACATCCGAGCATTGGGTGCGTAGGTCATCTTCGATAAAG 2049
Query 24008 GAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGCGGCAGA 24067
||| || | ||||||| ||| ||||| ||| ||| || || || | || | |
Sbjct 2048 CTGCCCGACGTTATCGCCATCATGCTGAAATTACAGTGCTGGCGTAGATGTGCGGGTAAA 1989
Query 24068 TGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAATACGTGG 24127
|| ||||||| |||||| || || ||||| ||||| | | || || || || | | |
Sbjct 1988 TGAATTTCCAAAAAGTCACGTGCAACCGCAATATCACTGAAAAATTTCTTAAACAGGCTG 1929
Query 24128 TCATGGTGCGACAGGGATTTCGTCATC 24154
|| ||||| || || || | ||||||
Sbjct 1928 TCGTGGTGGGAAAGTGACATAGTCATC 1902
>seq49942
Length=1266
Score = 109 bits (120), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 7/194 (4%)
Strand=Plus/Plus
Query 28708 TTCATGCCGCACCTCCCGCTTTCAGAAGGGCCGCACGCTGGCGAACGGTAAGGTGTTTGG 28767
||||||| |||||||| |||||| |||||| ||||| ||| |||||||| |
Sbjct 446 TTCATGCGGCACCTCCG------AGAAGGTACGCACGTTGGCGGGTGGTGAGGTGTTTCG 499
Query 28768 ATTGGTGGGCAAAGCTCAAAAGCTGCCCGGTCGTGATGCTGCACGCTTTCAACAGCCGTG 28827
|| | |||||||||| | |||| | || | |||| |||| || |||| || |||
Sbjct 500 ATGTGAAAACAAAGCTCAAGAACTGCTCTGTTGATATGCCGCACACTGTCAAAAGGTGTG 559
Query 28828 CGATATGCGTACTATTCCGCATAGCTCAACTCTTAGTCTACTTAGGTTTTGGGTTAGCTG 28887
||||||||||| ||| ||||||| |||| ||| ||||| ||||||||||||
Sbjct 560 CGATATGCGTAGCATTGCGCATAGTCTGACTCCTAGCTGGTTTAGGGGTTGGGTTAGCTG 619
Query 28888 ACTACGGGAAGGTC 28901
|| |||| |||||
Sbjct 620 GCTGCGGG-AGGTC 632
Score = 98.7 bits (108), Expect = 3e-16
Identities = 136/191 (71%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 48689 TCATGCGCCACCTCCCATGCTCAGGAGATAAGCACGTTGGCGAGGGGTCAAATGTCTGGA 48748
||||||| ||||||| | | || || ||||||||||| | ||| | ||| | ||
Sbjct 447 TCATGCGGCACCTCCGA------GAAGGTACGCACGTTGGCGGGTGGTGAGGTGTTTCGA 500
Query 48749 TTGGCGGGCAAAGCTCAAAAGCTGCCCGGTCGTGATCTTGCACGCTTTCAACAGCCGTGC 48808
| | |||||||||| | |||| | || | || |||| || |||| || ||||
Sbjct 501 TGTGAAAACAAAGCTCAAGAACTGCTCTGTTGATATGCCGCACACTGTCAAAAGGTGTGC 560
Query 48809 GATATGCGTACTATTCCGCATAGCTCAACTCCTAGTCTACGTAGGTTTTGGGTTAGCTGG 48868
|||||||||| ||| ||||||| |||||||| |||| |||||||||||||
Sbjct 561 GATATGCGTAGCATTGCGCATAGTCTGACTCCTAGCTGGTTTAGGGGTTGGGTTAGCTGG 620
Query 48869 CTGCGTGAGGT 48879
||||| |||||
Sbjct 621 CTGCGGGAGGT 631
>seq22547
Length=1033
Score = 104 bits (114), Expect = 8e-18
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 45181 AACGCCGGGCGGTGCTTCAGATGTTCGTCGCGCTCATCCACCCAGTAATCGAACTGGTCG 45240
|| |||||||||||| ||| || ||| | ||| || | | ||| ||||||| |||
Sbjct 870 AAGGCCGGGCGGTGCAGCAGGTGCTCGCCCAACTCGTCGATGCGGTAGTCGAACTCGTCA 929
Query 45241 GCGGTATACACCGCCTTGCTGACGATATTGGCGACCTGCCCGGATTGACGGGCACGCTTG 45300
| || || ||| ||||| || ||| || || ||||| ||||| || ||||| || |||
Sbjct 930 GAGGCGTAGACCACCTTGGCGATGATGTTCGCAACCTGACCGGACTGGCGGGCGCGTTTG 989
Query 45301 AGCACACCATCGACCATAGGCATGTAAACCAC 45332
||||| || || ||||| |||||||| |||||
Sbjct 990 AGCACCCCGTCAACCATCGGCATGTAGACCAC 1021
>seq62471
Length=1007
Score = 91.5 bits (100), Expect = 5e-14
Identities = 134/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 48724 GTTGGCGAGGGGTCAAATGTCTGGATTGGCGGGCAAAGCTCAAAAGCTGCCCGGTCGTGA 48783
||||||| | ||| | ||| | ||| | |||||||||| | |||| | || | |
Sbjct 458 GTTGGCGGGTGGTGAGGTGTTTCGATGTGAAAACAAAGCTCAAGAACTGCTCTGTTGATA 399
Query 48784 TCTTGCACGCTTTCAACAGCCGTGCGATATGCGTACTATTCCGCATAGCTCAACTCCTAG 48843
| |||| || |||| || |||||||||||||| ||| ||||||| ||||||||
Sbjct 398 TGCCGCACACTGTCAAAAGGTGTGCGATATGCGTAGCATTGCGCATAGTCTGACTCCTAG 339
Query 48844 TCTACGTAGGTTTTGGGTTAGCTGGCTGCGTGAGGTAATGA-CTCTCGTAGCTAGCGC-T 48901
|||| |||||||||||||||||| ||||| | ||||||| | ||||| |
Sbjct 338 CTGGTTTAGGGGTTGGGTTAGCTGGCTGCGGGAGGTTGCAAGCTCTCGTGGTCAGCGCTT 279
Query 48902 TTATTTA 48908
|||||||
Sbjct 278 TTATTTA 272
Score = 91.5 bits (100), Expect = 5e-14
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 28746 TGGCGAACGGTAAGGTGTTTGGATTGGTGGGCAAAGCTCAAAAGCTGCCCGGTCGTGATG 28805
||||| ||| |||||||| ||| | |||||||||| | |||| | || | |||
Sbjct 456 TGGCGGGTGGTGAGGTGTTTCGATGTGAAAACAAAGCTCAAGAACTGCTCTGTTGATATG 397
Query 28806 CTGCACGCTTTCAACAGCCGTGCGATATGCGTACTATTCCGCATAGCTCAACTCTTAGTC 28865
| |||| || |||| || |||||||||||||| ||| ||||||| |||| |||
Sbjct 396 CCGCACACTGTCAAAAGGTGTGCGATATGCGTAGCATTGCGCATAGTCTGACTCCTAGCT 337
Query 28866 TACTTAGGTTTTGGGTTAGCTGACTACGGGAAGGTCGAATTTCCTGTAGTTAGCGCTACT 28925
||||| |||||||||||| || ||||| | | || || || || |||||| |
Sbjct 336 GGTTTAGGGGTTGGGTTAGCTGGCTGCGGGAGGTTGCAAGCTCTCGTGGTCAGCGCTTTT 277
Query 28926 ACTTA 28930
| |||
Sbjct 276 ATTTA 272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 166664187370176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |