Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq65837 188 4e-43 seq65974 125 4e-24 >seq65837 Length=1221 Score = 188 bits (208), Expect = 4e-43 Identities = 480/723 (66%), Gaps = 12/723 (2%) Strand=Plus/Plus Query 14676 GACGAATATACGCAGTTACTTTATCACCTTCTG-CCGGAAGGACCTGCCTGGGACGGAGA 14734 |||||||||||||| ||| || || || | ||| || || || ||||| | ||| Sbjct 220 GACGAATATACGCAATTA-TTGCGAACATTATTACCGCCCGGCCCCGCATGGGATGAAGA 278 Query 14735 AAATCCACTGATTGAAGGGCTGGCGCCGTCGCTGAACCGGGTACATCAGAGAGCGGATGA 14794 | |||| || ||| ||||||| || || || ||| | || ||||| || ||| Sbjct 279 AGATCCGCTCATTAAAGGGCTAGCCCCTTCACTGGCACAGGCTCATCAACACGCCGATAG 338 Query 14795 ACTGATGGCTGAAATTGATCCGGCCAGAACCACAGAACTGATAGACCGTTATGAACAGCT 14854 |||||| ||||||| |||||||| | | ||| | || ||||||| ||| | | Sbjct 339 CCTGATGATTGAAATTAATCCGGCCCAATCGGTTGAATTAATTAACCGTTACGAAAAATT 398 Query 14855 GTATGGCCTGCCTGATTCCTG---TGC-ACCGGAAGGCGTGCAGACATTACAGCAGCGCC 14910 | |||| | || ||| || ||| | ||| |||| || || | | | | Sbjct 399 ATGTGGCTTACCAGATAAATGCCTTGCCAATAGAA----TGCAAACGCTAGAAGAAAGAC 454 Query 14911 AGCAACGTCTGGATGCAAAGGCGAATGTTGCCGGTGGTATAAACGAGAGGTTTTACCGGG 14970 ||||| || ||||| || | |||| | ||||| || || | | |||| Sbjct 455 AGCAAGTGCTTGATGCTAAAGTGAATACAGTAGGTGGCATTAATGCGGCTTTTTTTAAAA 514 Query 14971 AACAGCTTGATGCGTTGGGGTATACCGCTGCCACCATTGAGCAGTTTCAGAATCTCGACA 15030 | ||| | | || || ||| || || || || || || ||||| |||| || | Sbjct 515 AGCAGTTGGGAATATTAGGTTATCCCAAAGCAACAATAGAACAATTTCAACATCTTGATA 574 Query 15031 GCACACCCGATCCTGAATGGGGGGAATTCTGGCGTTACTACTGGCGTGTGAATATTCCGG 15090 | || || |||| | |||||||| ||||||||||||||||| || |||||||| | Sbjct 575 GTACGCCAAATCCGGCGTGGGGGGATAGGTGGCGTTACTACTGGCGAGTCAATATTCCCG 634 Query 15091 CTGATGCGAACATCAGCTGGCAGACCTGTACAAGCACCTGCGATTCTGCGATCAGAACGT 15150 || || || || ||||| | ||||| || | ||| || | || || | | Sbjct 635 TCGAGGCAAATATACGCTGGATTAGTTGTACCAGTTCTTGCAATGAGTCAATTAGGAGAT 694 Query 15151 GGGGCGATACTGTTGCTGAATGTGTGATTGATAAGCTTTGTCCGTCACATACGGTTGTTG 15210 ||||||||| || | ||||| |||||| | | ||||| |||||||| || Sbjct 695 GGGGCGATAGTGCAGTGGAATGCGTGATTAAACGCCAATGTCCTTCACATACCCAAGTAC 754 Query 15211 TTTTTGCTTATCCGGAAGGAAAAGAGAATGCACAGAATTGATACGCCCACCGCGCAAAAA 15270 ||||||| || | ||||| || | ||||| | |||||||| || |||||||||||| Sbjct 755 TTTTTGCCTACACCAAAGGAGAAAATGATGCATCGCATTGATACCCCAACCGCGCAAAAA 814 Query 15271 GATAAATTTGGTCAGGGAAAAAACGGATTTACGAATGGTGATCCCGCCAC-GGGCCGCCG 15329 || |||||||||||||| |||||||||||||| ||||| || | |||| || |||| Sbjct 815 GACAAATTTGGTCAGGGGAAAAACGGATTTACCAATGGCGACTCAACCACAGGAACGCC- 873 Query 15330 CGCAACGGATCTCAACAGTGATATGTGGGATGCAGTCCAGGAAGAGGTCTGCACTGTTAT 15389 |||| | | | | |||| ||||| | ||||||||||| || || ||| | Sbjct 874 ATCAACTAGTTTGGATGAGGCCATGTTCGATGCGTTTCAGGAAGAGGTTTGTACCGTTGT 933 Query 15390 TGA 15392 ||| Sbjct 934 TGA 936 Score = 188 bits (208), Expect = 4e-43 Identities = 480/723 (66%), Gaps = 12/723 (2%) Strand=Plus/Plus Query 54266 GACGAATATACGCAGTTACTTTATCACCTTCTG-CCGGAAGGACCTGCCTGGGACGGAGA 54324 |||||||||||||| ||| || || || | ||| || || || ||||| | ||| Sbjct 220 GACGAATATACGCAATTA-TTGCGAACATTATTACCGCCCGGCCCCGCATGGGATGAAGA 278 Query 54325 AAATCCACTGATTGAAGGGCTGGCGCCGTCGCTGAACCGGGTACATCAGAGAGCGGATGA 54384 | |||| || ||| ||||||| || || || ||| | || ||||| || ||| Sbjct 279 AGATCCGCTCATTAAAGGGCTAGCCCCTTCACTGGCACAGGCTCATCAACACGCCGATAG 338 Query 54385 ACTGATGGCTGAAATTGATCCGGCCAGAACCACAGAACTGATAGACCGTTATGAACAGCT 54444 |||||| ||||||| |||||||| | | ||| | || ||||||| ||| | | Sbjct 339 CCTGATGATTGAAATTAATCCGGCCCAATCGGTTGAATTAATTAACCGTTACGAAAAATT 398 Query 54445 GTATGGCCTGCCTGATTCCTG---TGC-ACCGGAAGGCGTGCAGACATTACAGCAGCGCC 54500 | |||| | || ||| || ||| | ||| |||| || || | | | | Sbjct 399 ATGTGGCTTACCAGATAAATGCCTTGCCAATAGAA----TGCAAACGCTAGAAGAAAGAC 454 Query 54501 AGCAACGTCTGGATGCAAAGGCGAATGTTGCCGGTGGTATAAACGAGAGGTTTTACCGGG 54560 ||||| || ||||| || | |||| | ||||| || || | | |||| Sbjct 455 AGCAAGTGCTTGATGCTAAAGTGAATACAGTAGGTGGCATTAATGCGGCTTTTTTTAAAA 514 Query 54561 AACAGCTTGATGCGTTGGGGTATACCGCTGCCACCATTGAGCAGTTTCAGAATCTCGACA 54620 | ||| | | || || ||| || || || || || || ||||| |||| || | Sbjct 515 AGCAGTTGGGAATATTAGGTTATCCCAAAGCAACAATAGAACAATTTCAACATCTTGATA 574 Query 54621 GCACACCCGATCCTGAATGGGGGGAATTCTGGCGTTACTACTGGCGTGTGAATATTCCGG 54680 | || || |||| | |||||||| ||||||||||||||||| || |||||||| | Sbjct 575 GTACGCCAAATCCGGCGTGGGGGGATAGGTGGCGTTACTACTGGCGAGTCAATATTCCCG 634 Query 54681 CTGATGCGAACATCAGCTGGCAGACCTGTACAAGCACCTGCGATTCTGCGATCAGAACGT 54740 || || || || ||||| | ||||| || | ||| || | || || | | Sbjct 635 TCGAGGCAAATATACGCTGGATTAGTTGTACCAGTTCTTGCAATGAGTCAATTAGGAGAT 694 Query 54741 GGGGCGATACTGTTGCTGAATGTGTGATTGATAAGCTTTGTCCGTCACATACGGTTGTTG 54800 ||||||||| || | ||||| |||||| | | ||||| |||||||| || Sbjct 695 GGGGCGATAGTGCAGTGGAATGCGTGATTAAACGCCAATGTCCTTCACATACCCAAGTAC 754 Query 54801 TTTTTGCTTATCCGGAAGGAAAAGAGAATGCACAGAATTGATACGCCCACCGCGCAAAAA 54860 ||||||| || | ||||| || | ||||| | |||||||| || |||||||||||| Sbjct 755 TTTTTGCCTACACCAAAGGAGAAAATGATGCATCGCATTGATACCCCAACCGCGCAAAAA 814 Query 54861 GATAAATTTGGTCAGGGAAAAAACGGATTTACGAATGGTGATCCCGCCAC-GGGCCGCCG 54919 || |||||||||||||| |||||||||||||| ||||| || | |||| || |||| Sbjct 815 GACAAATTTGGTCAGGGGAAAAACGGATTTACCAATGGCGACTCAACCACAGGAACGCC- 873 Query 54920 CGCAACGGATCTCAACAGTGATATGTGGGATGCAGTCCAGGAAGAGGTCTGCACTGTTAT 54979 |||| | | | | |||| ||||| | ||||||||||| || || ||| | Sbjct 874 ATCAACTAGTTTGGATGAGGCCATGTTCGATGCGTTTCAGGAAGAGGTTTGTACCGTTGT 933 Query 54980 TGA 54982 ||| Sbjct 934 TGA 936 >seq65974 Length=1275 Score = 125 bits (138), Expect = 4e-24 Identities = 179/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 48408 AAGATTTCTGATATCGTGACGCGGATTGGTCCGCTTGGCGGTGTTGCCGGAGTGGCATCC 48467 || || ||||| || ||||| || ||||| || || || | || || || | || ||| Sbjct 1260 AAAATCTCTGAAATTGTGACCCGTATTGGCCCACTGGGTGCAGTGGCGGGTCTTGCCTCC 1201 Query 48468 GGCGAAATTGCCGCGATGGGCGCCACCATTGCCGGGATGGGGGTTGAATCAGAAATTGCC 48527 || || |||||||| ||||||| || |||||||| ||||| || || ||||| | ||| Sbjct 1200 GGTGAGATTGCCGCACTGGGCGCAACAATTGCCGGTATGGGCGTCGAGTCAGATGTGGCC 1141 Query 48528 TCAACCGGCATCAAAAACTTCATGCTGTCGCTTACGGCGGGTAAATCCGCAACTAAGTCT 48587 ||||| || ||||||||||| |||||| || | || || ||||| || || || || Sbjct 1140 TCAACTGGTATCAAAAACTTTATGCTGGCGTTAACCAAAGGGAAATCAGCGACAAAATCA 1081 Query 48588 CAGAAAGAAGCCTTAAGAGCGCTGCGGATAAGCCCCACTAAATTAGCTGCTGAAATGCAA 48647 || ||| || ||| | | | || || |||| ||| | || || | |||||| Sbjct 1080 CAAAAAATTGCGTTACGCACCTTAAAAATCAGTCCCAAAAAACTGGCCGCACAGATGCAA 1021 Query 48648 AAAGACTCTAAA 48659 |||||| | ||| Sbjct 1020 AAAGACGCGAAA 1009 Score = 120 bits (132), Expect = 2e-22 Identities = 179/253 (71%), Gaps = 1/253 (0%) Strand=Plus/Minus Query 8818 AAGATTTCTGATATCGTGACGCGGATTGGTCCGCTTGGCGGTGTTGCCGGAGTGGCATCC 8877 || || ||||| || ||||| || ||||| || || || | || || || | || ||| Sbjct 1260 AAAATCTCTGAAATTGTGACCCGTATTGGCCCACTGGGTGCAGTGGCGGGTCTTGCCTCC 1201 Query 8878 GGCGAAATTGCCGCGATGGGCGCCACCATTGCCGGGATGGGGGTTGAATCAAGAAATTGC 8937 || || |||||||| ||||||| || |||||||| ||||| || || ||| || | || Sbjct 1200 GGTGAGATTGCCGCACTGGGCGCAACAATTGCCGGTATGGGCGTCGAGTCA-GATGTGGC 1142 Query 8938 CTCAACCGGCATCAAAAACTTCATGCTGTCGCTTACGGCGGGTAAATCCGCAACTAAGTC 8997 |||||| || ||||||||||| |||||| || | || || ||||| || || || || Sbjct 1141 CTCAACTGGTATCAAAAACTTTATGCTGGCGTTAACCAAAGGGAAATCAGCGACAAAATC 1082 Query 8998 TCAGAAAGAAGCCTTAAGAGCGCTGCGGATAAGCCCCACTAAATTAGCTGCTGAAATGCA 9057 || ||| || ||| | | | || || |||| ||| | || || | ||||| Sbjct 1081 ACAAAAAATTGCGTTACGCACCTTAAAAATCAGTCCCAAAAAACTGGCCGCACAGATGCA 1022 Query 9058 AAAAGACTCTAAA 9070 ||||||| | ||| Sbjct 1021 AAAAGACGCGAAA 1009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247273265804992