Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_033486.1 Length=1672 Score E Sequences producing significant alignments: (Bits) Value seq35791 118 1e-23 >seq35791 Length=1723 Score = 118 bits (130), Expect = 1e-23 Identities = 254/380 (67%), Gaps = 0/380 (0%) Strand=Plus/Minus Query 478 CAACATTTGTCAAAAACAAATTCTGAGTTTAAAAATGATCCTTTATATTTAGAAGCATTC 537 || ||||| || || || ||| || | || || ||||| || || | ||| | || Sbjct 1545 CATCATTTATCTAAGACGGCTTCGGATCTCAAGAACGATCCATTGTACATGGAATCTTTT 1486 Query 538 ATGCCTTCTCCTTCCGAGGAGTTGGTTCCAATAGCCGAAGAGTTAAATCATTTTCCGGGT 597 | || | || || |||||| ||||||| || ||||| || | ||||||| |||||| Sbjct 1485 TTCCCGTTACCATCAGAGGAGCTGGTTCCCATTGCCGAGGAACTTAATCATTATCCGGGC 1426 Query 598 TTTGATGGTTTAACCACATTAATTGAAGAAACATATGAAAATTTTTCTGCACATAATTTA 657 || || || | || | ||||| | ||||| ||||||||| | || ||| | | | Sbjct 1425 TTCGAAGGCATTACAGCCCTAATTAATGAAACTTATGAAAATATGTCAGCAAAGAGCCTG 1366 Query 658 AACTTTAAACGTTCTGTATCTTTATCTGCTTATTCTTATTATATTACTGTTTTGTCTTGG 717 |||||||||||||| || || | || || ||| | ||||| | | || | | ||| Sbjct 1365 AACTTTAAACGTTCAGTGTCGCTTTCCGCATATGCCTATTACGTATCCGTCCTCACATGG 1306 Query 718 GCCCGTGTTTTATATTTGAAGAAAATGAATAAATATAAATTAACTACTAACGAATTGGAG 777 || | | ||| | || ||||| |||||||||| || | || || | || | ||| Sbjct 1305 GCGAGGGCTTTGTGGTTAAAGAAGTTGAATAAATACAAGCTGACAACGCATGAGCTAGAG 1246 Query 778 TTTATTGAAATGGTTTATGAACAAGGCAATTTCTTATTACCTAAGAGTGTAATAATTTAT 837 || | | || | ||||| || ||| ||| | | ||||| ||||| | || | | Sbjct 1245 TTCCTCAATGTGATCTATGAGCAGGGCGATTATGTGCTCCCTAAAAGTGTGACCATATTT 1186 Query 838 CTTTCTGGTTTTGGTAATTT 857 || || ||| | || ||||| Sbjct 1185 CTATCAGGTCTAGGGAATTT 1166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5237871309216