Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_016654.1
Length=39474
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 316 5e-82
>seq19061
Length=15585
Score = 316 bits (350), Expect = 5e-82
Identities = 289/365 (79%), Gaps = 0/365 (0%)
Strand=Plus/Minus
Query 12175 GACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCG 12234
|||||| | ||||| | |||||||| || ||| || |||||| |||||||||| |||
Sbjct 14206 GACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGTTCACACCG 14147
Query 12235 GCCGGTGCTGCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAG 12294
|||| || |||||||| ||||||||||||||||| ||||| || || |||||| |||
Sbjct 14146 ACCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCGACCGTCAG 14087
Query 12295 GCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCC 12354
| ||||||||||||||||| || ||||||||| |||||||| | | ||||| ||||||
Sbjct 14086 ACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGCGCGAGGCC 14027
Query 12355 GCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTC 12414
|| |||||||| |||||| || | ||||| |||| |||||||| ||||||| ||||
Sbjct 14026 GCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCGGCAGGCTC 13967
Query 12415 AAGTCCCGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTC 12474
||| ||| | | |||||| || ||||| ||||||||||||||| |||| || || |||
Sbjct 13966 AAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGCTCGAAGTC 13907
Query 12475 GACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCCACCGTGAACAAGGCCAACCGCGGC 12534
||||||||||| || ||| |||||| ||||||| | |||||| ||| ||||||
Sbjct 13906 GACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCGCGCCGCGCGCGGC 13847
Query 12535 GGGGG 12539
|| ||
Sbjct 13846 GGCGG 13842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126164557281536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |