Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_031108.1
Length=39640
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 161 3e-35
>seq19061
Length=15585
Score = 161 bits (178), Expect = 3e-35
Identities = 251/357 (70%), Gaps = 4/357 (1%)
Strand=Plus/Minus
Query 36426 GCGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGAT--ATAC 36483
|||| ||| ||||| | || |||||| | || ||||| ||||| ||||| | | ||
Sbjct 14208 GCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGTTCACAC 14149
Query 36484 CAATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCG 36543
| | | ||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 14148 CGA--CCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCGACCG 14091
Query 36544 GCAAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCA 36603
|| ||||||| |||||||||||||| || |||||| ||| |||| | ||||| |
Sbjct 14090 TCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGCGCGA 14031
Query 36604 GCCGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACG 36663
| | || |||||||||||||| |||||| ||| |||| ||| || ||||| || |
Sbjct 14030 GGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCGGCAG 13971
Query 36664 TCTCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGA 36723
||| | |||| ||||| |||||| || | || || || ||| | ||||
Sbjct 13970 GCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGCTCGA 13911
Query 36724 AGTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGCCGC 36780
|||||| || | || || | || | ||||||| | || | |||||||||
Sbjct 13910 AGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCGCGCCGC 13854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126695628295552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |