Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq19061 161 3e-35 >seq19061 Length=15585 Score = 161 bits (178), Expect = 3e-35 Identities = 251/357 (70%), Gaps = 4/357 (1%) Strand=Plus/Minus Query 36426 GCGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGAT--ATAC 36483 |||| ||| ||||| | || |||||| | || ||||| ||||| ||||| | | || Sbjct 14208 GCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGTTCACAC 14149 Query 36484 CAATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCG 36543 | | | ||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 14148 CGA--CCGGCGCGGCCGTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCGACCG 14091 Query 36544 GCAAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCA 36603 || ||||||| |||||||||||||| || |||||| ||| |||| | ||||| | Sbjct 14090 TCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGCGCGA 14031 Query 36604 GCCGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACG 36663 | | || |||||||||||||| |||||| ||| |||| ||| || ||||| || | Sbjct 14030 GGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCGGCAG 13971 Query 36664 TCTCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGA 36723 ||| | |||| ||||| |||||| || | || || || ||| | |||| Sbjct 13970 GCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGCTCGA 13911 Query 36724 AGTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGCCGC 36780 |||||| || | || || | || | ||||||| | || | ||||||||| Sbjct 13910 AGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCGCGCCGC 13854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126695628295552