Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8793 154 3e-35 >seq8793 Length=2966 Score = 154 bits (170), Expect = 3e-35 Identities = 184/243 (76%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136 ||||||| |||| | ||| | ||| ||||| |||||| |||| | ||| ||||||||| Sbjct 1902 ACTTTGATTAAATCAATGTGATTAAAACAGGCGTTTGCTTGAATGCTTTATCATGGAATA 1843 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 |||||||| ||| | ||| || ||| ||||||| | | ||| || ||||||||||| || Sbjct 1842 ATAGAATATGAC-TTCGG-TCCATTCTGTTGGTCT-TGGGATCGAAGTAATGATTAAAAG 1786 Query 197 GGA-TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 | | | ||||||| || |||| || |||||||||||||||||| || Sbjct 1785 GAACAACTCGGGGGCATCCGTATCGCTGCGTGAGAGGTGAAATTCTTGGACCGCAGCGAG 1726 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 || | ||| ||||||||| || ||||| |||||||||||||||| |||||||||| || Sbjct 1725 ACGACCTATTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAG 1667 Query 316 GGG 318 || Sbjct 1666 AGG 1664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915078662784