Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq13027 96.9 3e-18 >seq13027 Length=117870 Score = 96.9 bits (106), Expect = 3e-18 Identities = 133/179 (74%), Gaps = 14/179 (8%) Strand=Plus/Plus Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69 ||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| ||||| Sbjct 15139 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGTGGGGA 15198 Query 70 -TTGGCACATACGAATT--GATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGG- 124 ||| || || |||| |||||| |||| ||||||||||| ||||| | || || | Sbjct 15199 ATTGTCA---ACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGC 15255 Query 125 -AGATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| |||| ||| | || | || ||| ||| ||||||||| ||||||||| Sbjct 15256 TAGTTATTACATA---CTAAGTATGTAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 15311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476738761298