Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq13027 145 1e-32 >seq13027 Length=117870 Score = 145 bits (160), Expect = 1e-32 Identities = 183/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || ||||| ||| || ||| Sbjct 16857 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTA-CGTGTTTGCAGA 16799 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||||||||||||||||| | | ||||| | || ||||| |||| Sbjct 16798 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 16746 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || | | |||| || ||||||| |||||||||| || | |||||||| | Sbjct 16745 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 16689 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| | || ||| | ||| ||||||||| |||||| ||||| ||||||||| Sbjct 16688 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCCACCAGTGTCGGTT 16630 Query 242 TACGGTA 248 | ||||| Sbjct 16629 TGCGGTA 16623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694310813434