Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8793 212 1e-52 >seq8793 Length=2966 Score = 212 bits (234), Expect = 1e-52 Identities = 198/245 (81%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | ||| Sbjct 1182 CAGTGTAGCGCGCGTGCAGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTAC-TCA 1240 Query 77 AACTTCCATTGGCTGGAAG-CCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA--TAGT 133 | || ||| | | ||| || | ||||||||||||| || || || || Sbjct 1241 ATCT--CATGCGGTTGAACACCGCTTATCCCTCTAAGAAGT-AGGTACGTCTCAATTAAC 1297 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 || ||| ||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct 1298 GCATCA--CTAGTTAGCAGGTTAGAGTCTCGTTCGTTATCGGAATAAACCAGACAGATCA 1355 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||| Sbjct 1356 ATCCACGAACTAAGAACGGCCATGCACCACCAACCACCAAATCAAGAAAGAACTATCAAT 1415 Query 254 CTGTC 258 ||||| Sbjct 1416 CTGTC 1420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796697661498