Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq13027 154 3e-35 >seq13027 Length=117870 Score = 154 bits (170), Expect = 3e-35 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| |||||||||||||||||||||||| ||| ||||||||||||| Sbjct 17217 GGACATTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 17276 Query 172 CCCAAAGATACCCT-CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||| || || ||| ||| ||||| || | ||| || |||| ||| || Sbjct 17277 TGCGAAGGTAAGCTAGAGC-TGGTCGGAAATCAGCTTGATAGTATAATGGCATAAGCTTG 17335 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||||| | |||| | ||||| |||||||||||| | || |||||||| | | Sbjct 17336 CCTGACTGCGAGGCTGACAAGCCAAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGAT 17395 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| || | |||||| ||||||||||| ||| | ||||||| Sbjct 17396 TCTGTATGGAAGGGTCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 17444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982269753408