Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq12990 316 4e-84 >seq12990 Length=87999 Score = 316 bits (350), Expect = 4e-84 Identities = 273/335 (81%), Gaps = 16/335 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||||| ||| || ||||||| ||||||||||||||||||||| Sbjct 86316 CTTTACAACCCAAAGGCCTTCTT-CACTCATGCGGCAT-GGCTGGATCAGGCTTTCGCCC 86373 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 86374 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAG 86433 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 | || ||||||||||||||||| ||| || |||| | |||||||| || ||||| || Sbjct 86434 TATGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAGGCTATTACTCCA 86493 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| | ||||||||||| ||| |||| || | || Sbjct 86494 CCAACTAGCTAATCTAATATAGGCTCATCTAATA--GCAA-----TAAATT-------TT 86539 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||||||| ||||| ||||||||| |||||||| | |||| || ||||| || Sbjct 86540 TCCCCCGTAGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAG 86599 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| ||||||||||||||| ||| || Sbjct 86600 GTAGATTCCTATACATTACTCACCCGTCTGCCACT 86634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071857874240