Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq13027 360 7e-97 >seq13027 Length=117870 Score = 360 bits (398), Expect = 7e-97 Identities = 417/553 (75%), Gaps = 8/553 (1%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGC 110 || ||||||||||| ||| ||||| |||||| ||| |||||||| | ||||||||| Sbjct 16030 GGTATTCGGAGTTTAGTTAGATTT-GGTAAGACGGTGAATCCCCCTAGTCTATCCAGTGC 15972 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| || || | ||| | ||||| |||||||| |||||| |||||||||||| Sbjct 15971 TCTACCCCCAACAACATACATACAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCT 15912 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | ||||||||||||||||||||||||| |||| |||||| | | || |||| Sbjct 15911 ATTTCCAAGTTTGATTGGCCTTTCACCCCTAATCACAACTCATCCAATAATGTTGCAACA 15852 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | | |||||| ||||||| || ||||| |||||| ||| |||| |||||| Sbjct 15851 TTAACTGGTTCGATCCTCCAGTGTGTTTTACCACACCTTCAATCTGGTCATGACTAGATC 15792 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 |||| | ||||||||| | | ||| | ||||||||||| |||| ||||||||||| Sbjct 15791 ACTTGGTTTCGGGTCTAATCCATAAAACTAAAACGCCCTATTCAGACTTGCTTTCGCTAC 15732 Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 | |||| || |||| |||| || || || | ||||||| | | |||| | |||| Sbjct 15731 GCCTACACCTAACGGCTTAAGCTTGCTTCA-TAGATTAACTCGCTGACCCATTATGCAAA 15673 Query 411 AGGCACGCCGTCAC-CT-GGTACC--TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466 ||| |||| ||||| || || | |||| | | |||||| || | ||||| ||| Sbjct 15672 AGGTACGCTGTCACTCTAAATATCAATAAATTGATATAGAGCTCCAACTGTTTGTAAGCA 15613 Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526 | || |||||| | |||||||||||||| || ||||| |||||||||||||||||||||| Sbjct 15612 CTTGATTTCAGATTCTATTTCACTCCCCTCCCGGGGTTCTTTTCACCTTTCCCTCACGGT 15553 Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 |||||| | ||||||||| ||| ||||||||||||| || ||||||| ||| |||| Sbjct 15552 ACTTGTTCACTATCGGTCGTTAAGTAGTATTTAGGCTTGGAGGATGGTCCCCCCATATTC 15493 Query 587 ACACGAAATTTCA 599 | || |||||| Sbjct 15492 AAACAGGATTTCA 15480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817359022592