Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq13027 271 2e-70 >seq13027 Length=117870 Score = 271 bits (300), Expect = 2e-70 Identities = 302/391 (77%), Gaps = 24/391 (6%) Strand=Plus/Minus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| | Sbjct 15845 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 15789 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163 ||||| |||||||| | | | |||| | ||||||| | ||||| ||||| |||||| Sbjct 15788 TGGTTT-CGGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTTGCTTT-CGCTAC 15732 Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | |||| | |||||||| || | | | ||| ||||||||||||||| |||| Sbjct 15731 GCCTACACCTAACGGCTTAAGCTT-GCTTCATAGATTAACTCGCTGACCCATTATGCAAA 15673 Query 223 AGGTACGCAGTCACCC--------AACAAAGTGG------GCTCCCACTGCTTGTACGCA 268 |||||||| ||||| | || ||| || ||||| |||| ||||| ||| Sbjct 15672 AGGTACGCTGTCACTCTAAATATCAATAAATTGATATAGAGCTCCAACTGTTTGTAAGCA 15613 Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 | |||||| ||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 15612 CTTGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTTCTTTTCACCTTTCCCTCACGG 15554 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATT 388 |||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||| Sbjct 15553 TACTTGTTCACTATCGGTCGTTAAGTAGTATTTAGGCTTGGAGGATGGTCCCCCCATATT 15494 Query 389 CAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 || ||| |||| ||||| ||| |||||| Sbjct 15493 CAAACAGGATTTCACGTGCCCCGCTCTACTC 15463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241435388672